Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lac5g0358 | ATGCTCTTGCAGAAGCGACAGTTTTATCACTCTCACAGGGTTCAGCCTATGGCACTAGATAAAGTACTATCTGACAAAGATAGTGAGGATGAAGTAGATGATGACATTGCAGATTTTGAAGACCGAAGGATGCTCGATGATTTTGTGGATGTCACCAAAGATGAAAAGCGGCTTATGCATCTATGGAACTCCTTTGTTAGAAAGCAAAGGGTGCTAGCTGATGGTCATGTTCCTTGGGCATGTGAAGCATTCTCAAAACTTCACGGGAAAGAGCTTGTCATATCTCCGGCTCTCTTTTGTGGGGTGAGCGGTTCGAAGCTCCAGATCTTTTTGGTTGAGGACAAATACTTTATGTCAGCAAGCAAAATCCCTATGATGACAGTAGGTGAAATCTCCTCGAGCAAGCTTCCAGAGGCTATGCTTGTCAAACAAGAGTTCTTATTGGGGGAATTGCCCAAACTATTGACCGCATAG | 474 | 43.88 | MLLQKRQFYHSHRVQPMALDKVLSDKDSEDEVDDDIADFEDRRMLDDFVDVTKDEKRLMHLWNSFVRKQRVLADGHVPWACEAFSKLHGKELVISPALFCGVSGSKLQIFLVEDKYFMSASKIPMMTVGEISSSKLPEAMLVKQEFLLGELPKLLTA | 157 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 3709100 | 3711003 | + | Lag0017442.1 | Lac5g0358 | 607000 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lac5g0358 | 157 | CDD | VEFS-box_EMF2-like | 3 | 100 | - | - | |
| Lac5g0358 | 157 | PANTHER | POLYCOMB GROUP PROTEIN | 2 | 99 | - | GO:0005634(PANTHER)|GO:0031490(PANTHER) | |
| Lac5g0358 | 157 | Pfam | VEFS-Box of polycomb protein | 2 | 95 | IPR019135 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lac5g0358 | Lac-Chr5:3709100 | Lac5g2754 | Lac-Chr5:45955214 | 1.10E-35 | dispersed |
Pathway information