Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lac5g0369 ATGTATATTGAGGAATTGAAGGAAGGGGAGTTGCAGAGTGGGGAAGAGGAAAATTCAGGTGTTATTGTTAGTAATTTGGAGAGCCAGAGCATTGTTAGGTCTGATGTAAAAAGGATCGTTGTTGGAGTTGGGGCTCGTGTTCTTTTCTATCCGACTTTGTTTTACAATGTTTTCAGAAATAAGTTTCAGACAGAGTTTCGTTGGTGGGACAAGGTCGATGAGTTTATATTGTTAGGTGCTGTTCCGTTCCCTGCTGATGTTCCCCGTTTAAAGGAGGTTGGCGTTCGAGGGGTGATAACACTTAATGAGCCATATGAGACTTTGGTTCCTACAACTCTATATCGTGATCACGAAATTGATCATCTGACCATTCCGACCAGAGACTATTGCTTTGCACCTTTATTGAGTGACATTTGCATTGCTGTAAATTTTATCCACAAAAATGCATCACATGGACAGACTACGTATGTTCATTGTAAAGCTGGACGAGGGCGTAGCACAACCATTGTTATATGCTATTTGGTGCAGTACAAGCAAATGACGCCAGATGAAGCGTATAAACATGTGAAGTCAATCAGGTCAAGGGTGCTTTTAGCTTCATCACAGTGGCAGGCTGTCCTGGAATTCTACCATCTGATTGTGCAGAAGGATGTTTCGTACTGCCACATAGATGATCTAGGAAAGAAAGTATCAGGATCATCGCATGATCTTATTGCATTTGATGATAGTTCTGTAGTAGTTGTAAAAGAATCCGATCTTGACGGATATGACCAAAGTATCGGCCAAAGTGAAATGGGTATCTGGGCAGATTTAAGTGTAGTCTGCAGGGTTCGTGTTGCTGGTCAGGCAGCCCTCACCAGAATCTCTTGTTTGTGGCTCAGTTATCGAGCAAAACACCATAGCCAGAAGATTTCAGGAGATGATCTTGGCGTCGGGAAGGGCTGTTCACTCAGTGCTACTCATTTGGAAGGGTTCAGTGTGGACATCCATGTCTATTAA 999 42.84 MYIEELKEGELQSGEEENSGVIVSNLESQSIVRSDVKRIVVGVGARVLFYPTLFYNVFRNKFQTEFRWWDKVDEFILLGAVPFPADVPRLKEVGVRGVITLNEPYETLVPTTLYRDHEIDHLTIPTRDYCFAPLLSDICIAVNFIHKNASHGQTTYVHCKAGRGRSTTIVICYLVQYKQMTPDEAYKHVKSIRSRVLLASSQWQAVLEFYHLIVQKDVSYCHIDDLGKKVSGSSHDLIAFDDSSVVVVKESDLDGYDQSIGQSEMGIWADLSVVCRVRVAGQAALTRISCLWLSYRAKHHSQKISGDDLGVGKGCSLSATHLEGFSVDIHVY 332
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
5 3875892 3882156 - Lag0017453.1 Lac5g0369 607011
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lac5g0369 332 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 62 214 IPR029021 -
Lac5g0369 332 ProSiteProfiles Dual specificity protein phosphatase domain profile. 68 215 IPR020422 GO:0006470(InterPro)
Lac5g0369 332 Pfam Dual specificity phosphatase, catalytic domain 108 210 IPR000340 GO:0016311(InterPro)
Lac5g0369 332 Gene3D Protein tyrosine phosphatase superfamily 68 218 IPR029021 -
Lac5g0369 332 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 136 204 IPR000387 GO:0016311(InterPro)
Lac5g0369 332 ProSitePatterns Tyrosine specific protein phosphatases active site. 157 167 IPR016130 GO:0016311(InterPro)
Lac5g0369 332 CDD PTPMT1 68 210 IPR044596 GO:0004721(InterPro)
Lac5g0369 332 SMART dsp_5 71 212 IPR020422 GO:0006470(InterPro)
Lac5g0369 332 PANTHER PHOSPHATIDYLINOSITOL PHOSPHATASE 1 287 - -
Lac5g0369 332 FunFam Dual specificity phosphatase domain protein 68 215 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac5g0369 Lac-Chr5:3875892 Lac6g3049 Lac-Chr6:48084646 6.30E-76 dispersed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac5g0369 - - - 0.0