Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lac5g0369 | ATGTATATTGAGGAATTGAAGGAAGGGGAGTTGCAGAGTGGGGAAGAGGAAAATTCAGGTGTTATTGTTAGTAATTTGGAGAGCCAGAGCATTGTTAGGTCTGATGTAAAAAGGATCGTTGTTGGAGTTGGGGCTCGTGTTCTTTTCTATCCGACTTTGTTTTACAATGTTTTCAGAAATAAGTTTCAGACAGAGTTTCGTTGGTGGGACAAGGTCGATGAGTTTATATTGTTAGGTGCTGTTCCGTTCCCTGCTGATGTTCCCCGTTTAAAGGAGGTTGGCGTTCGAGGGGTGATAACACTTAATGAGCCATATGAGACTTTGGTTCCTACAACTCTATATCGTGATCACGAAATTGATCATCTGACCATTCCGACCAGAGACTATTGCTTTGCACCTTTATTGAGTGACATTTGCATTGCTGTAAATTTTATCCACAAAAATGCATCACATGGACAGACTACGTATGTTCATTGTAAAGCTGGACGAGGGCGTAGCACAACCATTGTTATATGCTATTTGGTGCAGTACAAGCAAATGACGCCAGATGAAGCGTATAAACATGTGAAGTCAATCAGGTCAAGGGTGCTTTTAGCTTCATCACAGTGGCAGGCTGTCCTGGAATTCTACCATCTGATTGTGCAGAAGGATGTTTCGTACTGCCACATAGATGATCTAGGAAAGAAAGTATCAGGATCATCGCATGATCTTATTGCATTTGATGATAGTTCTGTAGTAGTTGTAAAAGAATCCGATCTTGACGGATATGACCAAAGTATCGGCCAAAGTGAAATGGGTATCTGGGCAGATTTAAGTGTAGTCTGCAGGGTTCGTGTTGCTGGTCAGGCAGCCCTCACCAGAATCTCTTGTTTGTGGCTCAGTTATCGAGCAAAACACCATAGCCAGAAGATTTCAGGAGATGATCTTGGCGTCGGGAAGGGCTGTTCACTCAGTGCTACTCATTTGGAAGGGTTCAGTGTGGACATCCATGTCTATTAA | 999 | 42.84 | MYIEELKEGELQSGEEENSGVIVSNLESQSIVRSDVKRIVVGVGARVLFYPTLFYNVFRNKFQTEFRWWDKVDEFILLGAVPFPADVPRLKEVGVRGVITLNEPYETLVPTTLYRDHEIDHLTIPTRDYCFAPLLSDICIAVNFIHKNASHGQTTYVHCKAGRGRSTTIVICYLVQYKQMTPDEAYKHVKSIRSRVLLASSQWQAVLEFYHLIVQKDVSYCHIDDLGKKVSGSSHDLIAFDDSSVVVVKESDLDGYDQSIGQSEMGIWADLSVVCRVRVAGQAALTRISCLWLSYRAKHHSQKISGDDLGVGKGCSLSATHLEGFSVDIHVY | 332 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 3875892 | 3882156 | - | Lag0017453.1 | Lac5g0369 | 607011 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lac5g0369 | 332 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 62 | 214 | IPR029021 | - | |
| Lac5g0369 | 332 | ProSiteProfiles | Dual specificity protein phosphatase domain profile. | 68 | 215 | IPR020422 | GO:0006470(InterPro) | |
| Lac5g0369 | 332 | Pfam | Dual specificity phosphatase, catalytic domain | 108 | 210 | IPR000340 | GO:0016311(InterPro) | |
| Lac5g0369 | 332 | Gene3D | Protein tyrosine phosphatase superfamily | 68 | 218 | IPR029021 | - | |
| Lac5g0369 | 332 | ProSiteProfiles | Tyrosine specific protein phosphatases domain profile. | 136 | 204 | IPR000387 | GO:0016311(InterPro) | |
| Lac5g0369 | 332 | ProSitePatterns | Tyrosine specific protein phosphatases active site. | 157 | 167 | IPR016130 | GO:0016311(InterPro) | |
| Lac5g0369 | 332 | CDD | PTPMT1 | 68 | 210 | IPR044596 | GO:0004721(InterPro) | |
| Lac5g0369 | 332 | SMART | dsp_5 | 71 | 212 | IPR020422 | GO:0006470(InterPro) | |
| Lac5g0369 | 332 | PANTHER | PHOSPHATIDYLINOSITOL PHOSPHATASE | 1 | 287 | - | - | |
| Lac5g0369 | 332 | FunFam | Dual specificity phosphatase domain protein | 68 | 215 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lac5g0369 | Lac-Chr5:3875892 | Lac6g3049 | Lac-Chr6:48084646 | 6.30E-76 | dispersed |
Pathway information