Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac5g0392 ATGAAGAAAGAAACAATGGAAGATTTTGCAATAATGGGTGGGTTGGTGGGAGTGCAGTTTGTTTATGCAGGGAACTCTGTTTTCATGAGTTTTCTAATGTCTTTGGGAATTGATCCTTTAACTCTTGTCATCTTCTCAACCTTCTCAACTTTTCTCATTGTCTCTCCCATTGCAGTTTATTTTGAAAGGTCTAATTGGCCAAAGAAACTTAGTCTAAAGTTGGTTTCTCAGCTTTTTCTCATATCCTTTGGAGGGGTTACATTGTTTCAGTCCCTTTTCTTGAAAGGAATACAGCTAACTTCGCCGACGTTAGCGACGGCGATGCCGAATCTCGCCCCGGGAATGATCTTTGCCATTGCTTGGATCTTTAGATTAGAAAAAGTTCGGCTAAGTTGCATATATAGCAAGATCAAGATTTTAGGAACATTTCTATGTGTGATAGGCGCGTTCACGATGAGCGCAATGCACGGCGCTGCAAAAGATAATATCACGCAGCGATCGCCTGCGACCGAGCATACGTTCAATGAACAGAAGATCCTCGGTTGCTTGTATCTGTTCTCGGCGATCATCGTTTTGTCGAGCATAGTTGTTCTACAGGCATCGACGCTAGGCGATTTCCCGGCACCGATGTCGTTGTGCGCGATAACGTCGCTGATTGGAGTGATCTTAACCATAGTTGTACAGATAGTTCAAAATCAGAAACTGGAAATTGGTTGGCCACTTCTTAGTGTTAAAGAATTGGCTGCCTATTGTATTCTAGGCGGAACCATTAGCGGGGCTTGCGTGAGCTTCAACGGGTGGGCGATGAAGAAACGAGGGCCGGTTCTCGTGTCGATGTTTAGTCCGATCGGAACCGTTTGCTCACTCATTCTCTCCGTTTTCACCTGGGGAGAATCCATCAACATTGGGAGCCTTGCTGGTATGTTCCTCATGTTCACCGGGCTCTACTTCGTGCTGTGGGCGAAAGGGAAGGAACGTTACGACAACCGAAACGGCCCCGAGAGTGAGTTCGACGTTGACAAGCCTCTTTTAAGTTGA 1038 45.86 MKKETMEDFAIMGGLVGVQFVYAGNSVFMSFLMSLGIDPLTLVIFSTFSTFLIVSPIAVYFERSNWPKKLSLKLVSQLFLISFGGVTLFQSLFLKGIQLTSPTLATAMPNLAPGMIFAIAWIFRLEKVRLSCIYSKIKILGTFLCVIGAFTMSAMHGAAKDNITQRSPATEHTFNEQKILGCLYLFSAIIVLSSIVVLQASTLGDFPAPMSLCAITSLIGVILTIVVQIVQNQKLEIGWPLLSVKELAAYCILGGTISGACVSFNGWAMKKRGPVLVSMFSPIGTVCSLILSVFTWGESINIGSLAGMFLMFTGLYFVLWAKGKERYDNRNGPESEFDVDKPLLS 345
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 4123821 4125587 + Lag0017476.1 Lac5g0392 607034
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac5g0392 345 PANTHER WAT1-RELATED PROTEIN 16 329 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Lac5g0392 345 SUPERFAMILY Multidrug resistance efflux transporter EmrE 242 324 - -
Lac5g0392 345 Pfam EamA-like transporter family 180 319 IPR000620 GO:0016020(InterPro)
Lac5g0392 345 Pfam EamA-like transporter family 16 153 IPR000620 GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac5g0392 Lac-Chr5:4123821 Lac6g2512 Lac-Chr6:42916749 9.20E-30 dispersed
Lac11g2287 Lac-Chr11:38947001 Lac5g0392 Lac-Chr5:4123821 9.10E-110 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac5g0392 - - - 0.0