Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac5g0585 ATGGAAGCTACAACGATATATTCGCACCATCAGAAAACAGTCATTGTGGATGCAGATGCTGACAATGACAAAAGAAAGATTGTTGCTTTTGTTGGAGGTCTTGATTTATGCTCGGGCAGATATGATACTCCCAAACATTCTCTTTTTCGGACATTGCAAACTACACATATGAACGACTACTATAACCATAATTTCAAGGGACCAACTACTGGTTGTCCAAGACAGCCATGGCATGATTTGCACTGTAAAATTGAAGGTCCAGCTGCATACGATGTGCTTGCAAATTTTGAGGAACGTTGGTTGAGAGATTCTGAGCCTCATGGGCTTAAGAAGCTTAAAAGGCTTCATAAGTTGAGTGATGATATATTGCTCAAACTTGAAGGAATTCCTGAAATTTTGGGAATTGCTGATGTTTCCAAGTTGTGTAGTGATCATCCAGAAGGTTGGAATGTTCAGGTTTTTCGTTCGATCGATTCCAATTCTGTGAAAGAATTTCCTGAAAATCCAAAAGATGCTATAAGTAGGGTAAGAGAAAAACTACAAAATTTAAAGTCCGATATGAGTATACATTCAGCATATGTTAATGCAATTCGTGCTGCCCAACGTTTCATTTACATTGAAAATCAATACTTCCTTGGATCATCTTATAATTGGAGTGCTCTTAATGAGAAAGATTGCACCCAAGAGATTTCAGCTTCTACATTGGACATGCCCCTGTACTCAGATTTAGCGTTGGACCGAGACACTACCTTCTACTTTGCCAAGTGCCAAGATACTAAATTAGAGCCCAAAAAGCTCACTTATGTTGAGCTCCTTGTGGTGTTTGCCTCTCCTATGCTCCTTGGACAACCTCTAGAGTCTTCCCTACAATACTCCGGGCCAAGAACGACTTGTGGGAGTCTATATAAGATAGGGAATGGGAAGGGAATGCTTGAAGCATCAAGCAATGGAGAAGAATGA 960 40.1 MEATTIYSHHQKTVIVDADADNDKRKIVAFVGGLDLCSGRYDTPKHSLFRTLQTTHMNDYYNHNFKGPTTGCPRQPWHDLHCKIEGPAAYDVLANFEERWLRDSEPHGLKKLKRLHKLSDDILLKLEGIPEILGIADVSKLCSDHPEGWNVQVFRSIDSNSVKEFPENPKDAISRVREKLQNLKSDMSIHSAYVNAIRAAQRFIYIENQYFLGSSYNWSALNEKDCTQEISASTLDMPLYSDLALDRDTTFYFAKCQDTKLEPKKLTYVELLVVFASPMLLGQPLESSLQYSGPRTTCGSLYKIGNGKGMLEASSNGEE 319
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 6561539 6565000 + Lag0017669.1 Lac5g0585 607227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac5g0585 319 SUPERFAMILY Phospholipase D/nuclease 182 221 - -
Lac5g0585 319 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 5 40 IPR001736 GO:0003824(InterPro)
Lac5g0585 319 PANTHER PHOSPHOLIPASE D 3 224 IPR015679 GO:0004630(PANTHER)|GO:0005886(PANTHER)|GO:0009395(PANTHER)
Lac5g0585 319 Gene3D Endonuclease Chain A 1 120 - -
Lac5g0585 319 Pfam Phospholipase D Active site motif 7 40 IPR001736 GO:0003824(InterPro)
Lac5g0585 319 SUPERFAMILY Phospholipase D/nuclease 7 104 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac5g0585 Lac-Chr5:6561539 Lac6g0544 Lac-Chr6:4523124 4.60E-60 dispersed
Lac5g0583 Lac-Chr5:6529221 Lac5g0585 Lac-Chr5:6561539 1.30E-98 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac5g0585 K01115 - csv:101208016 343.584