Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lac5g0613 ATGGGATTTCCTCTACTTGGTGAAACCCTGCAGTTCTTTGCTCCCAATACCTCCTCTGATGTTCCTCCTTTCATCAGAAAGAGAGTGGATAGGTATGGACCGATATTCAGAACAAGTTTGGTGGGAAGACCGCTGATTGTCTCAACAGACCCCGACTTGAGTTACTTTATCTTTCAACAAGAGGGACAATTGTTCCAAAGCTGGTATCCAGATACCTTCACAGAGATATTTGGAAAACAAAATGTTGGTTCGTTGCACGGTTTCATATATAAATATCTGAAGAACATGGTTCTTCATCTTTTTGGCCCTGAAAGTCTGAGAAAGATGATACCTGAAGTTGAGGCTGTAGCAACCAGAAGATTGAGACAATGGTCATCTCATGACTCAGTTGAATTGAAGGATAACACTGCAAGTATGATTTTTGATTTGACTGCAAAGAAGCTGATTAGTTATGATTCAGAAAATTCTTCGGAGAATTTGAGAGAGAACTTTGTTGCATTCATACAAGGCTTGATCTCCTTCCCTCTAAATGTTCCCGGAACTGCTTACAACAAATGCTTACAGGGCAGGAAAAGAGCAATGAGGATGCTGAAAAACATGTTACAAGACAGGCGGGCAAATCCAAGGAAACAGCAAATAGATTTTTACGATTTTGTTCTCGAAGAACTGCAGAAAGATGGAACTCTTCTCACTGAGGAAATTGCTTTGGACCTTATGTTTGTACTACTTTTCGCGAGCTTTGAAACTACTTCACTTGCTATTACTGCAGCCATTAAATTTCTCCTCAACAATCCTCATGTGCTGGAGGAGCTGACGGCTGAACATGAGGGAATATTGAAGAGAAGGGAAAATTCAGATTCTGGGCTTACATGGGGAGAATACAAATCCATGACATTCACATTTCAGTTCATCAATGAAACTGTGAGACTGGCAAATATAGTTCCGGGAATCTTTCGAAAAGCGCTGAGAGATATCCAGTTTAAGGGATATACCATTCCAGCAGGGTGGGCTGTTATGGTCTGCCCTCCGGCCGTGCACTTAAATCCAGAAAAGTACGTCGATCCCCTCACTTTTAACCCATGGCGATGGGAGAAATCTGAACTGAATGGAGCATCTAAACATTTCATGGCTTTCGGTGGGGGTATGAGGTTCTGTGTTGGTACAGATTTTACCAAAGTGCAAATGGCTGTGTTTCTCCATTGCCTGGTTACAAAGTACAGGTTCAAGGCAATCAAAGGAGGCAATATCGTCCGAACGCCCGGTTTACAGTTTCCCGACGGCTTCCACGTTCAGATCATGGAGAAATAG 1308 42.43 MGFPLLGETLQFFAPNTSSDVPPFIRKRVDRYGPIFRTSLVGRPLIVSTDPDLSYFIFQQEGQLFQSWYPDTFTEIFGKQNVGSLHGFIYKYLKNMVLHLFGPESLRKMIPEVEAVATRRLRQWSSHDSVELKDNTASMIFDLTAKKLISYDSENSSENLRENFVAFIQGLISFPLNVPGTAYNKCLQGRKRAMRMLKNMLQDRRANPRKQQIDFYDFVLEELQKDGTLLTEEIALDLMFVLLFASFETTSLAITAAIKFLLNNPHVLEELTAEHEGILKRRENSDSGLTWGEYKSMTFTFQFINETVRLANIVPGIFRKALRDIQFKGYTIPAGWAVMVCPPAVHLNPEKYVDPLTFNPWRWEKSELNGASKHFMAFGGGMRFCVGTDFTKVQMAVFLHCLVTKYRFKAIKGGNIVRTPGLQFPDGFHVQIMEK 435
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
5 7056717 7059465 - Lag0017697.1 Lac5g0613 607255
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lac5g0613 435 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 378 387 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Lac5g0613 435 FunFam Cytochrome P450 family protein 1 434 - -
Lac5g0613 435 SUPERFAMILY Cytochrome P450 2 431 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac5g0613 435 Gene3D Cytochrome P450 1 434 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac5g0613 435 PANTHER CYTOCHROME P450 26 1 406 - GO:0004497(PANTHER)|GO:0007275(PANTHER)|GO:0010268(PANTHER)|GO:0016125(PANTHER)|GO:0016132(PANTHER)|GO:0016491(PANTHER)
Lac5g0613 435 PRINTS P450 superfamily signature 385 396 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac5g0613 435 PRINTS P450 superfamily signature 376 385 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac5g0613 435 PRINTS P450 superfamily signature 302 313 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac5g0613 435 PRINTS P450 superfamily signature 245 262 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac5g0613 435 CDD CYP90-like 28 432 - -
Lac5g0613 435 Pfam Cytochrome P450 20 418 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac5g0613 435 PRINTS E-class P450 group IV signature 330 344 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac5g0613 435 PRINTS E-class P450 group IV signature 346 364 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac5g0613 435 PRINTS E-class P450 group IV signature 369 385 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac5g0613 435 PRINTS E-class P450 group IV signature 385 403 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac5g0613 435 PRINTS E-class P450 group IV signature 297 313 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac5g0613 435 PRINTS E-class P450 group IV signature 23 46 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac5g0613 Lac-Chr5:7056717 Lac8g2762 Lac-Chr8:44946909 2.10E-71 dispersed
Lac10g0357 Lac-Chr10:2801822 Lac5g0613 Lac-Chr5:7056717 2.60E-107 transposed
Lac4g2088 Lac-Chr4:40572981 Lac5g0613 Lac-Chr5:7056717 1.50E-118 transposed
Lac6g0434 Lac-Chr6:3550269 Lac5g0613 Lac-Chr5:7056717 1.20E-10 transposed
Lac5g0613 Lac-Chr5:7056717 Lac7g1577 Lac-Chr7:18166218 8.30E-60 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac5g0613 - - - 0.0