Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac5g0625 ATGGGTTCTTGCCATTCGTCTTCTAATGGGCGGCGGAGCAGCGGCGGCGCTGATTCTGCTGCTGCTGCAGCGGCGGCGGTGACGGCGGCAGCTGAGGCTCCGACGCCTTCTACAACAGAGCCCTTTTCTTCTTTTTCTTCTTCTTCTTCATTTTCGCACTCTAAGAGCAGTAGGCCGCGTTGGTGGAAGAAGAATTCGACTAAAACTTTTGGGGTTGGGGTTTGTTCAGAGAAGGTCCTTGAATTTGAGGTTCCAGGGAGGATTTGCTCTAATGGGTCGTCGAGAGTTGCTTGTTTGTATACGCAGCAGGGGAAGAAAGGGGTTAATCAAGACGCCATGGTTGTGCAGGAGAATTTCAGTTCAAGAAGAGATACGATATTTTGTGGGGTATTTGATGGACATGGTCCTTTCGGACATATGGTTGCGAAAAAAGTTCGTGATACCCTCCCCTTAATCCTATGTACACAATGGACATCTAAATCAGATGAAGATCAAAGCAGCCTCTCTAAGACGAGAGGTTCCAGAAGTTCAAATTCTGAAGATTCTGTAGCTCTAGACGCAGATGAAGAATTTTACAAGTCCTTGGAGGCTGAGGAAAATGAAAAATTCCCCAAGATGTTTCTGCCACTCAAAGTATCTATACTGAAGTCCTTCAAATTAATGGATAAAGAGTTGAAACTGCATCCTAAAATTGATTGTTTTTGCAGTGGATCAACCGCTGTGACTCTAATAAAGCAGGGTCAGAACCTTGTGCTTGGAAATGTTGGTGACTCGAGAGCGGTGCTGGCTACAAGAGACGAAGATAACTCTTTGATTCCAGTTCAATTAACCGTGGATTTGAAACCTGACCTTCCTGGCGAAGCTGCTAGGATCCAGCAATGCAAAGGAAGGGTCTTTGCTTTGCAGGATGAGCCCGAAGTTGCACGAGTATGGTTGCCTAATAACGATTCACCTGGCTTGGCAATGGCAAGAGCTTTTGGAGACTTTTGTCTAAAGGATTTTGGGCTAATTTCCGTTCCCGATGTATACTATCGTCACCTTACCGCGAGAGATCAGTTTGTAATTCTTGCCACTGATGGGGTTTGGGACGTCCTCTCGAATAAGGAAGCAATCGAAATTGTGGCATCAGCCCCTTCTCGCGAAACGGCAGCCAGAGCTCTTGTCGACTGTGCCATTCGTGCATGGAGGCTGAAATATCCCACATCCAAGAATGATGATTGTGCTGTTGTATGTCTCTTTCTTGAGTACGAACCTGAAGCAGAAGAGAATATGGAAACTTGCGCAAAAGCAGTGGAAGAAGTTCTGGCCACACCAAGCGCCAATTCTAAAGATATCGAAGTTGATTCCGACCATGGAATGACTGTTCTTGAGCGGTCTGGTACTCTACAAAGCTCTAATGAGATTGTACCTGTCTGCGACTCGATAGACGAGAAAGTTGCAGCTGGAGGCCGAAATCCGTCGAAGAGAAGCTTAGCTGAGTTCATTTCAAATGAAGAGGAGGAATGGTCTGCATTGGAGGGTATTACCAGAGTGAATAGTTTGCTAAGCCTTCCAAGGTTTCTATCTGGTGACAAAAGATCAAGCAGTTGGAGGAAGTGGCTATGA 1605 46.11 MGSCHSSSNGRRSSGGADSAAAAAAAVTAAAEAPTPSTTEPFSSFSSSSSFSHSKSSRPRWWKKNSTKTFGVGVCSEKVLEFEVPGRICSNGSSRVACLYTQQGKKGVNQDAMVVQENFSSRRDTIFCGVFDGHGPFGHMVAKKVRDTLPLILCTQWTSKSDEDQSSLSKTRGSRSSNSEDSVALDADEEFYKSLEAEENEKFPKMFLPLKVSILKSFKLMDKELKLHPKIDCFCSGSTAVTLIKQGQNLVLGNVGDSRAVLATRDEDNSLIPVQLTVDLKPDLPGEAARIQQCKGRVFALQDEPEVARVWLPNNDSPGLAMARAFGDFCLKDFGLISVPDVYYRHLTARDQFVILATDGVWDVLSNKEAIEIVASAPSRETAARALVDCAIRAWRLKYPTSKNDDCAVVCLFLEYEPEAEENMETCAKAVEEVLATPSANSKDIEVDSDHGMTVLERSGTLQSSNEIVPVCDSIDEKVAAGGRNPSKRSLAEFISNEEEEWSALEGITRVNSLLSLPRFLSGDKRSSSWRKWL 534
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 7426645 7435829 - Lag0017709.1 Lac5g0625 607267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac5g0625 534 Pfam Protein phosphatase 2C 172 393 IPR001932 -
Lac5g0625 534 MobiDBLite consensus disorder prediction 32 56 - -
Lac5g0625 534 MobiDBLite consensus disorder prediction 163 181 - -
Lac5g0625 534 FunFam probable protein phosphatase 2C 33 91 417 - -
Lac5g0625 534 MobiDBLite consensus disorder prediction 1 61 - -
Lac5g0625 534 CDD PP2Cc 95 414 IPR001932 -
Lac5g0625 534 PANTHER PROTEIN PHOSPHATASE 86 413 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Lac5g0625 534 MobiDBLite consensus disorder prediction 1 15 - -
Lac5g0625 534 SMART PP2C_4 85 412 IPR001932 -
Lac5g0625 534 Gene3D - 89 416 IPR036457 -
Lac5g0625 534 MobiDBLite consensus disorder prediction 163 182 - -
Lac5g0625 534 ProSiteProfiles PPM-type phosphatase domain profile. 96 414 IPR001932 -
Lac5g0625 534 SUPERFAMILY PP2C-like 90 415 IPR036457 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac12g0692 Lac-Chr12:7201165 Lac5g0625 Lac-Chr5:7426645 5.40E-121 dispersed
Lac1g1821 Lac-Chr1:39862721 Lac5g0625 Lac-Chr5:7426645 2.30E-89 dispersed
Lac2g0444 Lac-Chr2:3277745 Lac5g0625 Lac-Chr5:7426645 2.40E-83 dispersed
Lac4g1732 Lac-Chr4:36221281 Lac5g0625 Lac-Chr5:7426645 1.20E-118 dispersed
Lac5g0625 Lac-Chr5:7426645 Lac9g2142 Lac-Chr9:40949550 3.90E-120 dispersed
Lac5g0625 Lac-Chr5:7426645 Lac6g1670 Lac-Chr6:24678812 2.20E-139 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac5g0625 - - - 0.0