Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac5g0642 ATGGAGTACTTTTCTTATATTTCTCCATTACTTTTGTTCTTCTTTTTTCTTCAAACATCTGCCATTCCTACTAAAAAGTCTTACATTGTTTATTTGGGATCGCACTCTAATGGATTGAATCCTACGGTATATAACCCCCAAGCTGCTACGGAGTCCCAATATGATCTATTAGGAACAGTCACGGGAAGCAAATTGACAGCCAAAGAATCGATTATCTACTCGTATAATAGATATATTAATGGTTTTGCTGCTGTACTTGACGAAAAAGAAGCTGCAGCTCTCGCAAAGAATCCAAATGTGGTGTCGGTTTTTGAGAACAAGGAAAGAAAATTGCATACAACACGAACATGGGGTTTTCTTGGGGTCGATAGTGATAATGGAATTCCTCCAAACTCCATTTGGAAAGCTGCTAGGTTTGGAGAAGATACAATTATAGGGAACCTCGACACAGGTGTTTGGCCAGAGTCCCAGAGCTTCAATGATGCAGGCTATGGCCCTGTACCTTCAAGGTGGAGGGGAGCCTGTGAAGGTGGCACAAACTTTCGTTGCAACAAGAAGTTGATTGGAGCACGATATTTCTACCAAGGATTTGCAAGCACACATGGTCCTATGAACAATACCTTCGACACTGCACGAGACCATGAAGGCCATGGATCACATACTTTGTCTACTGCCGGTGGCAACTTTGTCCCTGGAGCCAATATCTTTGGCTATGCGAATGGGACTGCCAAAGGAGGTTCCCCAAAAGCTCGTGTTGCTGCCTACAAGGTGTGTTGGCCTGCTTCCACTGGTGGCTGTTATGATTCCGATATCCTAGCTGGTTTCGAAGCCGCCATTAGCGACGGTGTCGATGTTCTCTCAGTCTCTCTTGGTACAGCAGCTCAAGAGTTTGCTTACGACTCTGTATCAATAGGGGCTTTCCATGCCGTTCAACAAGGAATTGTCGTGGTTTGCTCGGCAGGTAATGATGGCCCTACTCCTGGCAGTGTGAGCAATGTATCTCCCTGGATGTTCACTGTTGGAGCTAGTTCTATTGACCGAGACTTCACCAATTATGTGGCCCTTGGAAATAAGAAGCATCTCAAGGGTACAAGTCTTTCATCTGGGGGATTGCGAGGTGGTAAGTTCTACCCTTTGATCAATGCTGCTGAAGCAAAAGCTGCCAATGCCTCTGATAACGATGCGCAACTTTGCAAAGATGGATCCCTTGATCCCACTAAGGCAAAAGGGAAGATTGTAGTTTGCCTTCGAGGAGACAATGGAAGAGTGGACAAGGGTGTCGAGGTTCGTCGTGTCGGTGGTGTCGGTATGGTTTTGGTAAATACTGAGAAAGACGGATCAGACGTTATAGCCGATACGCACTTACTTCCAGCTTCTCATATAAGCTACGTCGATGGACTTTCTATCGTCCAATATATTAACTCGACCAAAACACCCATGGCTTTCATAACCCATGTGAAGACCGAGATGGGAATTAAACCATCACCTATCATGGCTGGATTCTCATCAAGAGGCCCTAATTCCATCACAGAGGCCATGATCAAGCCTGATATAACAGCACCGGGTGTGAGTATACTCGCATCTGTCACAGAAGATGTAACTGCAACAAATTCACCATTCGATACGCGTCGAGTGCCTTTTAATGTTGAATCTGGAACTTCAATGTCTTGCCCACACATCGCAGGTGTTGCTGGCCTCCTCAAGACCCTTTATCCCACATGGAGTCCAGGAGCAATCAAATCTGCCATCATGACTACAGCCAAGACGAGAGACAACACCATGCATTCAATATTGGACTACACCAAAGTTAAGGCAACCCCGTTAGATTATGGTTCAGGACATGTCAATCCAAACAATGCAATGGACCCTGGTCTCGTTTACGACACGACCTTTGATGACTACATGAACTTCTTATGTGCGCGGGGCTACAACTCTCTCGCACTTAAGAAATTCTCTAATAAGCCATTTGTTTGTGCTAAATCATTTGAAATCACAGATCTCAACTACCCATCAATCTCGATCCCAAATTTGCAAATTGGTGCCCCAGTGACAATCAATAGAAGAGTTAAGAATGTCGGAAGTGCAGGCACGTATGTGGCACGAGTGAAGGTGCCCCCAGGAGTTGCAGTTACAGTTGAGCCGAGTTCGTTGCAATTTAACAGTGTAGGTGAAGAGAAAGCTTTCAAGCTTGTATTTCAATACACTGGAAAAGTGAAGCGTCAAGGCTATGTGTTTGGGACATTGGTATGGTCAGATGGAAAACATTTTGTTAGAAGTCCTATTGCAGTGAAATTGGGATGA 2301 44.94 MEYFSYISPLLLFFFFLQTSAIPTKKSYIVYLGSHSNGLNPTVYNPQAATESQYDLLGTVTGSKLTAKESIIYSYNRYINGFAAVLDEKEAAALAKNPNVVSVFENKERKLHTTRTWGFLGVDSDNGIPPNSIWKAARFGEDTIIGNLDTGVWPESQSFNDAGYGPVPSRWRGACEGGTNFRCNKKLIGARYFYQGFASTHGPMNNTFDTARDHEGHGSHTLSTAGGNFVPGANIFGYANGTAKGGSPKARVAAYKVCWPASTGGCYDSDILAGFEAAISDGVDVLSVSLGTAAQEFAYDSVSIGAFHAVQQGIVVVCSAGNDGPTPGSVSNVSPWMFTVGASSIDRDFTNYVALGNKKHLKGTSLSSGGLRGGKFYPLINAAEAKAANASDNDAQLCKDGSLDPTKAKGKIVVCLRGDNGRVDKGVEVRRVGGVGMVLVNTEKDGSDVIADTHLLPASHISYVDGLSIVQYINSTKTPMAFITHVKTEMGIKPSPIMAGFSSRGPNSITEAMIKPDITAPGVSILASVTEDVTATNSPFDTRRVPFNVESGTSMSCPHIAGVAGLLKTLYPTWSPGAIKSAIMTTAKTRDNTMHSILDYTKVKATPLDYGSGHVNPNNAMDPGLVYDTTFDDYMNFLCARGYNSLALKKFSNKPFVCAKSFEITDLNYPSISIPNLQIGAPVTINRRVKNVGSAGTYVARVKVPPGVAVTVEPSSLQFNSVGEEKAFKLVFQYTGKVKRQGYVFGTLVWSDGKHFVRSPIAVKLG 766
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 7928245 7933415 - Lag0017726.1 Lac5g0642 607284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac5g0642 766 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 28 761 IPR045051 -
Lac5g0642 766 ProSitePatterns Serine proteases, subtilase family, serine active site. 552 562 IPR023828 -
Lac5g0642 766 FunFam Subtilisin-like protease SBT1.5 638 766 - -
Lac5g0642 766 PRINTS Subtilisin serine protease family (S8) signature 213 226 IPR015500 -
Lac5g0642 766 PRINTS Subtilisin serine protease family (S8) signature 140 159 IPR015500 -
Lac5g0642 766 PRINTS Subtilisin serine protease family (S8) signature 551 567 IPR015500 -
Lac5g0642 766 Gene3D - 638 765 - -
Lac5g0642 766 FunFam Subtilisin-like protease SBT5.3 17 112 - -
Lac5g0642 766 CDD Peptidases_S8_3 110 587 IPR034197 -
Lac5g0642 766 Pfam PA domain 377 469 IPR003137 -
Lac5g0642 766 Pfam Subtilase family 140 591 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Lac5g0642 766 Gene3D - 346 490 - -
Lac5g0642 766 Gene3D Peptidase S8/S53 domain 142 634 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Lac5g0642 766 SUPERFAMILY Subtilisin-like 111 625 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Lac5g0642 766 FunFam subtilisin-like protease SBT1.5 346 490 - -
Lac5g0642 766 Pfam Peptidase inhibitor I9 27 112 IPR010259 -
Lac5g0642 766 CDD PA_subtilisin_like 352 483 - -
Lac5g0642 766 SUPERFAMILY Protease propeptides/inhibitors 26 109 - -
Lac5g0642 766 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 17 112 IPR037045 -
Lac5g0642 766 ProSiteProfiles Serine proteases, subtilase domain profile. 116 621 - -
Lac5g0642 766 Pfam Fibronectin type-III domain 666 763 IPR041469 -
Lac5g0642 766 FunFam Subtilisin-like protease SBT1.5 142 359 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac1g3457 Lac-Chr1:53945135 Lac5g0642 Lac-Chr5:7928245 2.10E-170 dispersed
Lac2g2441 Lac-Chr2:35412559 Lac5g0642 Lac-Chr5:7928245 6.80E-83 dispersed
Lac2g2442 Lac-Chr2:35422186 Lac5g0642 Lac-Chr5:7928245 4.70E-212 dispersed
Lac5g0642 Lac-Chr5:7928245 Lac5g0701 Lac-Chr5:8748604 9.0e-312 dispersed
Lac5g0642 Lac-Chr5:7928245 Lac5g0734 Lac-Chr5:9543800 5.20E-283 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac5g0642 - - - 0.0