Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac5g0703 ATGGAGGCTAATTCCAATAATAATAATAATCTTCCTCCATTGCTTTTGTTGTTCTTCTTCTTGATCTCTCTATTGCAATCTTCTACCATTGCCACACAAAAGTCTTACATCGTTTACTTGGGCTCGCAACTCTCCTCTTCTTTGGGTCCTTCCGCTTTGTCAGAACAATCCCGACAAGTGACAGCGTCTCATTATGATTTGTTGGGGTCGATGTTGGGAAGTAAAACGATGGCCCAGGAAGCCATTTTCTACTCCTATACTAGAAGTTTCAATGGTTTCGCAGCCAAACTTGATGAGAAGGAAGCAGCTGATCTAGCAAGAAACCCTAAGGTGATATCGGTGTTTGAAAATAAGCCGAGAAAATTGCATACAACACGATCGTGGAATTTTCTTGGGTTGGAAAATGATGCAGGAATTCCTTCAAACTCCATTTGGAATGCTGCCAAGTTTGGTCAAGATGTCATTCTAGCCAACGTCGACACAGGTGTTTGGCCGGAATCACAGAGCTTCAGTGACGAAGGGTACGGACCTGTGCCATCAAAGTGGCGGGGCATTTGTCAATCCGACTCCACCTTCCATTGCAATAAAAAGCTTATTGGAGCAAGGTATTTCTACAAAGGATATGAAGCCGCCGGAGGCGTCCTCAATGCCAGTTTACTCACCGTACGCGACCACGACGGCCATGGAACTCACACTCTCTCCACTGCCGCCGGAAACTTCGTCCCCGGAGCCAACGTTTTCGGCCATGGAAACGGCACGGCCAAAGGCGGTGCTCCAAAAGCCCGCGTCGCTGCCTACAAAGTCTGCTGGCCTGCATTCATGGACGGACAGTGCTTCGATGCCGATACGCTCGCCGCATTCGAAGCCGCCATCGCCGACGGAGTCGACGTCATATCGGTTTCCCTCGGTGGAACCGCCAATGAATTTGTCAACGATCCACTTTCTATAGTCGCCTTCCACGCCGTTCAACAAGGGATCGTCGTCGTCTTCTCCGCCGGAAACTCCGGTCCTTTTCCGGGGACCGTCACCAATGTCGCACCCTGGCAGATCACCGTCGCGGCGAGCACCAACGACAGAGATTTCGCCAGTTATGTCGCGCTTGGAAATAAGAAACGCCTAAAGGGTGTAAGCCTTTCTTCAGTTGCCCCGTTACCTAAGAAGTTCTATCCATTGATCACTTCTGTGGATGCAAGATTCAGCAATGTCACCGAATACCATGCGCAATTTTGTGACGAGGGGACGCTTGATCCGATCAAGGTGAAGGGGAAGATCTTGATCTGCCTTTCAGGGGAGATTGAAGGAATAGATAAGGGCTTCCAGGCAGCTCGAGCAGGTGCTGTGGGAGTGGTTGTGGCTAACGATCTAGAAGTGGGGAACGAAATCTATCCGGAGTTGCACTTCCTTCCAGCTTCCGATATTACCAGTAACGATAACCAATTGCTCAAGCAATACCTGAATTCCACCAAGACACCGGTGGCTCATATAAAGAAGGTGATTAATCAGCTGGGAGTAAAACCAGCTCCAGTCATGGCTTCCTTCTCATCCAGAGGCCCCAACCCAATAGAGAGCTCCATCCTCAAGCCTGACATAACAGCGCCGGGTGTGAACATACTGGCGTCTTACCCCACTGGAAAGGCCCCGACCTCTTCCATCAGCGACCGACGGCGCATCCCGTTTAATGTAATCTCCGGCACCTCCATGTCCTGCCCTCACATCTCTGGCATCGCTGCCCTTCTCAAGTCCATTCATCCCGAATGGAGCCCTGCTGCCATCAAATCTGCCATTGTGACCACTGCCAAAACCAGAGGCAACAACTTGCAAACGATCCTCGACTCGAACAAACTTAGAGCCAGCCCATTCGCTTATGGCGCGGGACTTGTTAATCCAAATAATGCAATGGACCCTGGCCTTGTTTATGATACTACTGTCGATGACTATTTGAACTTCTTGTGTGCTCGAGGCTACAACGCAACGCAAATCAGGCAATTCGACACGAAGCCATTTATTTGTTCCAAAACATTCAAACTCACGGATCTCAACTACCCATCGATCTCGGTCGGGGAATTGAAAATTGGTGCTCCCGTGACGATCAATAGAAGAGTTAAGAATGTGGGAAATCCAGGCACATATGTTGCACGGGTTAAGGTGTCCCCCGGAGTTGCGGTTTCGGTCGAGCCGAGCACGTTGCAGTTTAGCAGTGTGGGTGAAGAGAAGGCCTTCAAGGTCGTGTTGCAAAACACAGGAAAAGTAACACGTAATGGCTATGTGTTTGGAACATTGATCTGGTCTGACGGGAAGCATTTTGTTAGAAGTCCTATGGCAATCGATTTGGAATAA 2337 49.51 MEANSNNNNNLPPLLLLFFFLISLLQSSTIATQKSYIVYLGSQLSSSLGPSALSEQSRQVTASHYDLLGSMLGSKTMAQEAIFYSYTRSFNGFAAKLDEKEAADLARNPKVISVFENKPRKLHTTRSWNFLGLENDAGIPSNSIWNAAKFGQDVILANVDTGVWPESQSFSDEGYGPVPSKWRGICQSDSTFHCNKKLIGARYFYKGYEAAGGVLNASLLTVRDHDGHGTHTLSTAAGNFVPGANVFGHGNGTAKGGAPKARVAAYKVCWPAFMDGQCFDADTLAAFEAAIADGVDVISVSLGGTANEFVNDPLSIVAFHAVQQGIVVVFSAGNSGPFPGTVTNVAPWQITVAASTNDRDFASYVALGNKKRLKGVSLSSVAPLPKKFYPLITSVDARFSNVTEYHAQFCDEGTLDPIKVKGKILICLSGEIEGIDKGFQAARAGAVGVVVANDLEVGNEIYPELHFLPASDITSNDNQLLKQYLNSTKTPVAHIKKVINQLGVKPAPVMASFSSRGPNPIESSILKPDITAPGVNILASYPTGKAPTSSISDRRRIPFNVISGTSMSCPHISGIAALLKSIHPEWSPAAIKSAIVTTAKTRGNNLQTILDSNKLRASPFAYGAGLVNPNNAMDPGLVYDTTVDDYLNFLCARGYNATQIRQFDTKPFICSKTFKLTDLNYPSISVGELKIGAPVTINRRVKNVGNPGTYVARVKVSPGVAVSVEPSTLQFSSVGEEKAFKVVLQNTGKVTRNGYVFGTLIWSDGKHFVRSPMAIDLE 778
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 8815119 8820539 + Lag0017787.1 Lac5g0703 607345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac5g0703 778 Pfam Fibronectin type-III domain 678 775 IPR041469 -
Lac5g0703 778 ProSitePatterns Serine proteases, subtilase family, serine active site. 564 574 IPR023828 -
Lac5g0703 778 FunFam Subtilisin-like protease SBT1.5 650 778 - -
Lac5g0703 778 Gene3D Peptidase S8/S53 domain 153 646 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Lac5g0703 778 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 23 123 IPR037045 -
Lac5g0703 778 Pfam Peptidase inhibitor I9 35 123 IPR010259 -
Lac5g0703 778 CDD Peptidases_S8_3 121 599 IPR034197 -
Lac5g0703 778 Gene3D - 358 502 - -
Lac5g0703 778 SUPERFAMILY Subtilisin-like 122 637 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Lac5g0703 778 FunFam subtilisin-like protease SBT1.5 358 501 - -
Lac5g0703 778 Pfam Subtilase family 151 611 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Lac5g0703 778 PRINTS Subtilisin serine protease family (S8) signature 224 237 IPR015500 -
Lac5g0703 778 PRINTS Subtilisin serine protease family (S8) signature 151 170 IPR015500 -
Lac5g0703 778 PRINTS Subtilisin serine protease family (S8) signature 563 579 IPR015500 -
Lac5g0703 778 FunFam Subtilisin-like protease SBT1.5 153 371 - -
Lac5g0703 778 Gene3D - 650 777 - -
Lac5g0703 778 CDD PA_subtilisin_like 364 495 - -
Lac5g0703 778 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 36 773 IPR045051 -
Lac5g0703 778 Pfam PA domain 410 477 IPR003137 -
Lac5g0703 778 ProSiteProfiles Serine proteases, subtilase domain profile. 127 633 - -
Lac5g0703 778 FunFam Subtilisin-like protease SBT5.3 25 123 - -
Lac5g0703 778 SUPERFAMILY PA domain 409 459 IPR046450 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac5g0703 Lac-Chr5:8815119 Lac5g0732 Lac-Chr5:9514990 1.30E-284 dispersed
Lac5g0701 Lac-Chr5:8748604 Lac5g0703 Lac-Chr5:8815119 1.30E-252 proximal
Lac5g0703 Lac-Chr5:8815119 Lac5g0704 Lac-Chr5:8823980 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac5g0703 - - - 0.0