Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac5g0704 ATGAAGAATTCCAATCTTCCTCCATTGCTTTTGCTCCTCCTCTTCTCTTTGTTGCAAACTTCCACTATTGCCACAAAAAAGTCATACATCGTTTATTTGGGATCACAATCATCGTCCGGTGCTCCAAGTCATCCTTTTCATTTGCCTATTCGTCAATTTTCTTTAAAATTTCTTCAACAAATAAAAGAATTCCAATATAATTTACTGGGATCTTTGTTGGGAAGTAAAAAAGTAGCTGAGGAAGCAATTTTCTACTCCTATGCAAGATGTTTCAATGGTTTTGCAGCCATACTCAATGAGAAAGAAGCAGCAGATTTAGCGAGAAGCCCAGAAGTGATATCGGTGTTCGAAAACAAGGGAAGAAAAAAGCACACAACAGAGTCATGGAGTTTTCTTGGGGTGGAGAGTGAAGAAGGAATTCCTTCCAACTCCATTTGGAATGCAGCAGACTTTGGTCAAGATATGATTATAGCCAACATAGACACAGGTGTTTGGCCAGAATCGGAGAGCTTTAGCGACGAAGGGTATGGACCCATACCATCAAAGTGGAAAGGCACGTGTCCAACCGACGACACCAACTTCCGGTGCAACAGGAAGCTTATTGGAGGAAGGTATTTCTACAAAGGATATGAAGCCGAAGGAGGCATTCTCAACGATACTTCACGTTCCCTACGCGATTACGAAGGCCATGGAACCCACACTCTCTCCACCGCCGCCGGCAACTTCGTCCCCGGAGCCAACATTTTCGGCCATGGAAACGGCACGGCCAAAGGCGGCGCTCCAAAAGCCCGCGTCGCCGCCTACAAGGTCTGCTGGCCTTCCTTACCCACCGGAGAGTGCTTCGATGCCGATACCCTCGCCGCCTTCGAAGCCGCTGTTGCCGACGGAGTCGACGTCATATCCGCTTCCATCGGTGGAGGCGACGAAGACTTCCTCAACGATCCGCTTGCCATCGCCGCCTTCCATGCCGTTCAACAAGGCGTCGTCGTTGTTTGCTCCGCCGGAAACACAGGTCCTTTTCCGGGGACAGTCTCCAACGTCGCCCCGTGGGAGATCACCGTCGCTGCGAGCACCAGCGGCAGAGATTTTGTCAGTTACGTCGCCCTTGGAAATAACATAAGTCTAAAGGGCACAAGCCTTTCTTCAGTTGGCGCATCACCTGAACAATTCTATCCGTTGATCGGTTCTGTGGATGCGAAATTCAGCAATGTCAGCGATTACGATGCGCAATTTTGTGGCGAGGGAACGCTTGATCCGAACAAGGTAAAGGGGAAGATCTTGATCTGCCTTACAGGGGAACTTGCAGGAGTTGACAAGGGTTACCATGCTGCTCAAGCAGGTGCTGTTGGGATGATTGTGGCTAACGACATAGAAAACGGTGACAAAATCAATCCTGAGTTACATTTCCTTCCAGCTTCGGATATAACCTATAGCGATGCCGAATTGCTTTACCAATACATGAACTCCACCAAGACACCAGTGGCTCAGATAATGAATGTAACCATAGATGTGGGACTAAAAACAGCTCCAGTCATTGCTCCATTCTCATCCAGAGGTCCCAACCCATTAGAGAAGTCCATCCTCAAGCCTGACATAACAGCCCCGGGTGTGAACATTCTGGCGTCTTACCCCACCGGAAGAGCCCCGACAGCTTCCCTCTATGACCAACGACGCATCCCGTTTAATATACTCGCCGGTACCTCCATGGCTTGCCCTCACATCTCTGGCATTGTGGCCCTTCTCAAGTTCATTCATCCCGATTGGAGCCCTGCTGCAATCAAATCTGCCCTCATGACCACTGCCAAAACAAGTGACAAAAACTTGCAGTCGATTCTCAACTCAACCGAACTCGAAGAAACCCCATTCGCTTATGGGGCAGGACATGTTCGCCCGAATGACGCAATGGACCCTGGCCTTGTTTATGATGCTTCAGTTGATGATTATTTGAATTTCTTGTGTGCTCGAGGTTACAATGCAAGTGAAATCAAAAGATTCTATGAGAAACCATTTGTCTGTGCAAAATCATTTGAAGTTACAGATCTCAACTATCCATCTATCTCAATTCCAAATTTAAATGTGAGTACTCGGGTAACAATCAATAGAAGAGTTAAGAATGTGGGAAGTTCAGGCACATATATGGCGCGAGTCGAGGTGCCATCAGGAGTTGTGGTATCGGTTGAGCCAACTATGTTGCACTTTAGAAGTGTGGGTGAAGAGAAGGCATTCAAGGTCGTATTTCAAAACACAGGAAATGTGGAACATGAAGGTTATATGTTCGGGACATTGATATGGACCGATGGGAAGCATTTTGTTAGAAGTCCTATTGCAATGAATTTGGGACGATGA 2346 47.36 MKNSNLPPLLLLLLFSLLQTSTIATKKSYIVYLGSQSSSGAPSHPFHLPIRQFSLKFLQQIKEFQYNLLGSLLGSKKVAEEAIFYSYARCFNGFAAILNEKEAADLARSPEVISVFENKGRKKHTTESWSFLGVESEEGIPSNSIWNAADFGQDMIIANIDTGVWPESESFSDEGYGPIPSKWKGTCPTDDTNFRCNRKLIGGRYFYKGYEAEGGILNDTSRSLRDYEGHGTHTLSTAAGNFVPGANIFGHGNGTAKGGAPKARVAAYKVCWPSLPTGECFDADTLAAFEAAVADGVDVISASIGGGDEDFLNDPLAIAAFHAVQQGVVVVCSAGNTGPFPGTVSNVAPWEITVAASTSGRDFVSYVALGNNISLKGTSLSSVGASPEQFYPLIGSVDAKFSNVSDYDAQFCGEGTLDPNKVKGKILICLTGELAGVDKGYHAAQAGAVGMIVANDIENGDKINPELHFLPASDITYSDAELLYQYMNSTKTPVAQIMNVTIDVGLKTAPVIAPFSSRGPNPLEKSILKPDITAPGVNILASYPTGRAPTASLYDQRRIPFNILAGTSMACPHISGIVALLKFIHPDWSPAAIKSALMTTAKTSDKNLQSILNSTELEETPFAYGAGHVRPNDAMDPGLVYDASVDDYLNFLCARGYNASEIKRFYEKPFVCAKSFEVTDLNYPSISIPNLNVSTRVTINRRVKNVGSSGTYMARVEVPSGVVVSVEPTMLHFRSVGEEKAFKVVFQNTGNVEHEGYMFGTLIWTDGKHFVRSPIAMNLGR 781
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 8823980 8833627 + Lag0017788.1 Lac5g0704 607346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac5g0704 781 Gene3D - 360 504 - -
Lac5g0704 781 Pfam Subtilase family 152 609 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Lac5g0704 781 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 16 124 IPR037045 -
Lac5g0704 781 FunFam subtilisin-like protease SBT1.5 360 503 - -
Lac5g0704 781 FunFam Subtilisin-like protease SBT5.3 18 124 - -
Lac5g0704 781 CDD PA_subtilisin_like 366 497 - -
Lac5g0704 781 PRINTS Subtilisin serine protease family (S8) signature 565 581 IPR015500 -
Lac5g0704 781 PRINTS Subtilisin serine protease family (S8) signature 152 171 IPR015500 -
Lac5g0704 781 PRINTS Subtilisin serine protease family (S8) signature 226 239 IPR015500 -
Lac5g0704 781 SUPERFAMILY Subtilisin-like 124 639 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Lac5g0704 781 Gene3D - 652 779 - -
Lac5g0704 781 CDD Peptidases_S8_3 122 601 IPR034197 -
Lac5g0704 781 Pfam Peptidase inhibitor I9 28 123 IPR010259 -
Lac5g0704 781 ProSitePatterns Serine proteases, subtilase family, serine active site. 566 576 IPR023828 -
Lac5g0704 781 Gene3D Peptidase S8/S53 domain 154 648 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Lac5g0704 781 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 29 775 IPR045051 -
Lac5g0704 781 FunFam Subtilisin-like protease SBT1.5 652 779 - -
Lac5g0704 781 ProSiteProfiles Serine proteases, subtilase domain profile. 128 635 - -
Lac5g0704 781 Pfam Fibronectin type-III domain 680 776 IPR041469 -
Lac5g0704 781 Pfam PA domain 411 483 IPR003137 -
Lac5g0704 781 FunFam Subtilisin-like protease SBT1.5 154 384 - -
Lac5g0704 781 SUPERFAMILY PA domain 411 493 IPR046450 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac5g0704 Lac-Chr5:8823980 Lac5g0732 Lac-Chr5:9514990 6.30E-268 dispersed
Lac5g0704 Lac-Chr5:8823980 Lac5g0706 Lac-Chr5:8861346 2.60E-250 proximal
Lac5g0703 Lac-Chr5:8815119 Lac5g0704 Lac-Chr5:8823980 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac5g0704 - - - 0.0