Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac5g0706 ATGGATCGAATCCTTCTCCGGTCGATCTACAACGCGCGACTGAATCTCACTATAGTTTACTCGGCTAAGGAAGCAATTTTCTACTCCTACAACAGACATATCAATGGCTTTGCAGCCATGCTTGATCAGAAAGCTGCAGAAGATCTAGCAAAACATCCTGCTGTGGCATCGATCAATGAGAACAAGGGACGAAAACTGCACACAACAAGTTCATGGAATTTTCTTGGAGTAGAGCATGATGATGGAATCCCTGCAAATTCTATTTGGAATCTTGCAAGTTTTGGTGAATCTACAATCATTGGCAACCTTGACACAGGTGTATGGCCAGAATCAAAGAGTTTCAGTGATGAAGGATATGGGCCTATCCCAACAAGGTGGAGGGGAAGTTGTGAGGGTGGCTCCAAATTTCATTGCAATAGGAAGCTGATTGGAGCAAGGTATTTCAACAAAGGTTATGCAGCCTATGTGGGATCCCTCAATGCCAGCTTTGAAACGGCTAGGGACCATGATGGCCATGGAACTCACACTTTATCCACAGCTGGAGGCAACTTCATTTCTGGAGCTAGCGTTTTTGGGAATGGCAATGGAACTGCAAAGGGTGGATCCCCCAAAGCCCGTGTTGTTGCCTATAAGGTGTGCTGGCCTAAAATAGACTCTGGTGGGGCCTTCCATGCAGTTCAACATGGTATTATCGTTGTTTGCTCTGCTGGAAACTCAGGACCAGCTCCAGGGACTGTAGAAAATGTGGCACCCTGGCTTGTTACAGTGGGTGCTAGCACAATCAATAGACAGTTTACCAGTTATGTGGCCCTTGGAAACAAGATGCATATCAAGGGTGCAAGTCTTTCTGATAAAATATTGCCATCTCAGAAGTTCTATCCATTGATCAATTCTGTAGATGCAAAAGCCAGCAGCGTCTCTAACAACAACGCCCAACTGTGTGAGGAGGGGTCTCTTGATCCTAAAAAGGTAAAAGGGAAGATTCTAGTTTGCCTTAGAGGGGAAAATGGAAGAGTGGACAAGGGTTTTATGGCTGCTCAAGCAGGTGCTGTTGGGATGATTCTAGCTAACAGTGAGCAAAATGGGGATGAACTTACAGCTGATGCACACCTACTTCCTGCTTCCCATGTAAGCTACACTGATGGCAGATCAATCTACCAATACATCAACTCCACCAAAACTCCAATGGCTTACATGACTCACGTAAGGACAGAGCTGGGAATCAAACCAGCGCCAGTTATGGCTTCATTCTCATCCAGAGGTCCCAATACAATCGAGGAGTCAATACTCAAGCCTGATATAACAGCACCAGGTGTCAATATAATCGCAGCCTACTCTGAAGAAGCATCACCAAGCGGTTCATCATTTGATAACCGTCGAATTCCATTCAATATAATATCTGGCACTTCCATGTCATGCCCCCACATTTCTGGTATTGTTGGCCTTCTCAAGACCCTTTATCCAAAATGGAGTCCAGCAGCCATCAAATCTGCAATCATGACCACAGCTGGAACAAGAGCCAATGACTTGCATCCAATACTAAACACAACCAAGATTAAAGCCAATCCATTTGCATACGGTGCAGGACATGTCCATCCAAACAGAGCAGTGAACCCTGGCCTTGTTTACGATCTTACCACCAAGGACTACTTGAATTTCTTGTGTGCTCGAGGCTACAACGAAACACAAATCAGTAAATTCTCCAATACGTCCTTCGTTTGCTCGAAGTCATTCAAATTAAGAGATTTCAACTACCCATCTATCTCCATACCCAATCTGAAATCAGGCCGTGTGACAATCAAAAGAACAGTTAAGAATGTGGGAAGTCCAGGCACTTACACTGCGCGGGTCAAGGTACCTCCAGGAGTTTCAGTTTCAGTTGAGCCAAGTGCGTTGAAGTTTACTGGAATTGATGAAGAGAAGACTTTCAAAGTTGTTGTATTGCGGAGCTTAGCGAACAACAAGCGTCGAGGCTATGTATTTGGGTCACTGGAATGGTCAGATGGGAAGCATCATGTGAGAAGTCCAATTGCAGTGAATTTGGGATGA 2049 44.95 MDRILLRSIYNARLNLTIVYSAKEAIFYSYNRHINGFAAMLDQKAAEDLAKHPAVASINENKGRKLHTTSSWNFLGVEHDDGIPANSIWNLASFGESTIIGNLDTGVWPESKSFSDEGYGPIPTRWRGSCEGGSKFHCNRKLIGARYFNKGYAAYVGSLNASFETARDHDGHGTHTLSTAGGNFISGASVFGNGNGTAKGGSPKARVVAYKVCWPKIDSGGAFHAVQHGIIVVCSAGNSGPAPGTVENVAPWLVTVGASTINRQFTSYVALGNKMHIKGASLSDKILPSQKFYPLINSVDAKASSVSNNNAQLCEEGSLDPKKVKGKILVCLRGENGRVDKGFMAAQAGAVGMILANSEQNGDELTADAHLLPASHVSYTDGRSIYQYINSTKTPMAYMTHVRTELGIKPAPVMASFSSRGPNTIEESILKPDITAPGVNIIAAYSEEASPSGSSFDNRRIPFNIISGTSMSCPHISGIVGLLKTLYPKWSPAAIKSAIMTTAGTRANDLHPILNTTKIKANPFAYGAGHVHPNRAVNPGLVYDLTTKDYLNFLCARGYNETQISKFSNTSFVCSKSFKLRDFNYPSISIPNLKSGRVTIKRTVKNVGSPGTYTARVKVPPGVSVSVEPSALKFTGIDEEKTFKVVVLRSLANNKRRGYVFGSLEWSDGKHHVRSPIAVNLG 682
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 8861346 8864495 + Lag0017790.1 Lac5g0706 607348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac5g0706 682 Gene3D Peptidase S8/S53 domain 98 216 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Lac5g0706 682 FunFam Subtilisin-like protease SBT1.5 554 682 - -
Lac5g0706 682 SUPERFAMILY Subtilisin-like 66 541 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Lac5g0706 682 FunFam subtilisin-like protease SBT1.5 262 406 - -
Lac5g0706 682 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 221 677 IPR045051 -
Lac5g0706 682 Pfam Fibronectin type-III domain 582 679 IPR041469 -
Lac5g0706 682 PRINTS Subtilisin serine protease family (S8) signature 467 483 IPR015500 -
Lac5g0706 682 PRINTS Subtilisin serine protease family (S8) signature 95 114 IPR015500 -
Lac5g0706 682 PRINTS Subtilisin serine protease family (S8) signature 168 181 IPR015500 -
Lac5g0706 682 Gene3D - 554 681 - -
Lac5g0706 682 Pfam Subtilase family 223 529 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Lac5g0706 682 CDD PA_subtilisin_like 268 397 - -
Lac5g0706 682 Pfam PA domain 308 385 IPR003137 -
Lac5g0706 682 ProSitePatterns Serine proteases, subtilase family, serine active site. 468 478 IPR023828 -
Lac5g0706 682 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 5 67 IPR037045 -
Lac5g0706 682 Pfam Peptidase inhibitor I9 21 67 IPR010259 -
Lac5g0706 682 SUPERFAMILY Protease propeptides/inhibitors 18 62 - -
Lac5g0706 682 Gene3D - 262 406 - -
Lac5g0706 682 Gene3D Peptidase S8/S53 domain 221 550 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Lac5g0706 682 SUPERFAMILY PA domain 321 396 IPR046450 -
Lac5g0706 682 CDD Peptidases_S8_3 65 503 IPR034197 -
Lac5g0706 682 ProSiteProfiles Serine proteases, subtilase domain profile. 71 537 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac5g0706 Lac-Chr5:8861346 Lac5g0732 Lac-Chr5:9514990 7.60E-262 dispersed
Lac5g0704 Lac-Chr5:8823980 Lac5g0706 Lac-Chr5:8861346 2.60E-250 proximal
Lac5g0706 Lac-Chr5:8861346 Lac5g0710 Lac-Chr5:8919702 2.10E-299 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac5g0706 - - - 0.0