Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac5g0710 ATGTTTGTGTCAAATGGGCTTTCTTGTAAGATTTTTCTTCATCTTGTGCAGTCTTATATTGTTTACTTGGGATCACATTCACATGGGTTGAATCCTTCTGAAATTGATGTCCAAATTGCAACAGAATCTCACTACAATTTACTTGGCTCCTTCTTAGGAAGCAATGAAGCAGCTGAAGAAGCCATTTTCTACTCATATAATAGACATATCAATGGCTTTGCTGCTGTGCTTGATCAGAAAGTTGCAGAAGATCTAGCAAAACATCCTAATGTGATATCAGTACTGGAAGACAAGGCAAGAAAACTGCACACAACAGGTTCATGGAGCTTTCTTGGCCTAGAGAATGAGAATGATGGTGGAATTCCTCCAAACTCTCTTTGGAATCTTGCAAGTTTTGGTGAATCTACCATCATTGCCAATCTTGACACAGGTGTCTGGCCAGAATCAAAGAGCTTTGATGATAAAGGATATGGACCTATCCCAACAAGGTGGAAGGGAAGTTGTGAAGGTGGCTCCAACTTCCATTGCAACAGGAAGCTGATAGGAGCAAGGTATTTCAACAAAGGGTACGGATCCATCGCAGGACCTCTGAATGCAAGCTTTGAATCAGCAAGGGACCATGAAGGCCACGGAACGCACACTCTATCCACAGCTGGAGGGAATTTCGTTTCAGGAGTAAGCGTTTTTGGGAATGGTTATGGCACTGCAAAAGGTGGTTCGCCAAAAGCGCTTGTTGCTGCCTATAAAGTGTGCTGGCCTCCACTGTTGTTTTTTGGCGAGTGTTTTGAGACCGACATTCTAGCTGGTATTGAAGCTGCCATTAGTGATGGAGTTGATGTTCTGTCGGTTTCACTCGGTGGAGGTATCGCAGATTTTGTCGATGATGCTTTAGCCATAGGGGCCTTCCATGCTGTTCAGCAGGGCATCACTGTCGTTTGCTCTGCTGGGAACTCTGGACCGGCTCCTGGCTCTGTCTCAAATGTGGCACCATGGATTTTAACTGTGGGTGCTAGCACAACAGATAGGCTTTTTACCAGTTATGTGGCCCTCGGAAGCAAGAAGCATATCAAGGGTACAAGTCTTTCTGACAAAACACTGCCAACTCAGAGATTCTATCCATTGATCAGTTCTGTAGATGCAAAAGCCAAGAATGTCTCTAACAAGGACTCCCTACTGTGTGAAAAAGAGTCTCTTGATCCTGAAAAGGTAAGAGGGAAGATTGTGGTTTGCCTTAGAGGGGACAATGCAAGAGTGGACAAGGGTTATGTGGTTGCTGATGCAGGTGGTGTTGGGATGATTCTAGCTAACAGTGAGGAAAATGGGGATGAACTTTTAGCTGATCCACATTTCCTCCCTGCTTCCCATATTACCTATACTGATGGTCAATCAGTCTACCAATACATCAACTCTACCAAAATTCCAATGGCTTTCATGACTCGAGTAAGGACAGAGGTGGGAGTGAAACCAGCACCATTTATGGCTGAATTCTCATCAAGAGGACCCAACGAAATTGAGGCTTCAATACTCAAGCCTGATATAACAGCGCCAGGTGTCAGTATAATAGCGGCTTTCGCCGGAGATTTATCACCAACCGGTGAAGAACTTGATACACGTCGGATTCCATATATGGCAGAATCTGGCACTTCCATGTCATGCCCCCATGTTTCTGGGATCGTTGGCCTTCTCAGAACCCTTTATCCAAAGTGGAGTCCAGCAGCTATCAGATCTGCAATCATGACCACAGCTGAAACGAAAGCCAACGACTTAAACCCAATACTAAGCTCAAGGCAGGTGAAAGCAACCCCATTCGAGTACGGAGCAGGACATGTGAATCCAAACAGAGCCGCAAACCCAGGCCTCGTCTACGACCTGACGACCAAGGACTACTTGAACTTCTTATGCGCTCACGGCTACAACGAAACCCAGCTCAAGCAATTCTCCAACGCCACATTCGCCTGTTCGAAGACCTTCAAAGTCACAGATCTCAACTACCCATCCATCTCCATACCCGATCTGAAAGTGGGGGCGGCCAAAGTCAAAAGAAGAGTGAAGAATGTGGGGAGTCCGGGCACTTACGTTGCTCAGGTCAAGGCACCGCCGGGCGTCTCGGTCTCGGTCGAGCCAAGCAGTTTGAAGTTCACTGGAGTTGGTGAGGAGAAGAGCTTCAGAGTTGTGCTGAAGAGAGTGCCGAATGATTATCATGGAGGGTATGTGTTCGGGAGACTCGCTTGGTCCGATGGGAAGCATCGGGTTAGGAGTCCGATTGTGGTGAATTTGGGATGA 2283 46.61 MFVSNGLSCKIFLHLVQSYIVYLGSHSHGLNPSEIDVQIATESHYNLLGSFLGSNEAAEEAIFYSYNRHINGFAAVLDQKVAEDLAKHPNVISVLEDKARKLHTTGSWSFLGLENENDGGIPPNSLWNLASFGESTIIANLDTGVWPESKSFDDKGYGPIPTRWKGSCEGGSNFHCNRKLIGARYFNKGYGSIAGPLNASFESARDHEGHGTHTLSTAGGNFVSGVSVFGNGYGTAKGGSPKALVAAYKVCWPPLLFFGECFETDILAGIEAAISDGVDVLSVSLGGGIADFVDDALAIGAFHAVQQGITVVCSAGNSGPAPGSVSNVAPWILTVGASTTDRLFTSYVALGSKKHIKGTSLSDKTLPTQRFYPLISSVDAKAKNVSNKDSLLCEKESLDPEKVRGKIVVCLRGDNARVDKGYVVADAGGVGMILANSEENGDELLADPHFLPASHITYTDGQSVYQYINSTKIPMAFMTRVRTEVGVKPAPFMAEFSSRGPNEIEASILKPDITAPGVSIIAAFAGDLSPTGEELDTRRIPYMAESGTSMSCPHVSGIVGLLRTLYPKWSPAAIRSAIMTTAETKANDLNPILSSRQVKATPFEYGAGHVNPNRAANPGLVYDLTTKDYLNFLCAHGYNETQLKQFSNATFACSKTFKVTDLNYPSISIPDLKVGAAKVKRRVKNVGSPGTYVAQVKAPPGVSVSVEPSSLKFTGVGEEKSFRVVLKRVPNDYHGGYVFGRLAWSDGKHRVRSPIVVNLG 760
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 8919702 8925243 + Lag0017794.1 Lac5g0710 607352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac5g0710 760 SUPERFAMILY Protease propeptides/inhibitors 18 100 - -
Lac5g0710 760 ProSitePatterns Serine proteases, subtilase family, serine active site. 547 557 IPR023828 -
Lac5g0710 760 FunFam Subtilisin-like protease SBT5.3 11 103 - -
Lac5g0710 760 Pfam PA domain 389 463 IPR003137 -
Lac5g0710 760 FunFam Subtilisin-like protease SBT1.5 135 362 - -
Lac5g0710 760 ProSiteProfiles Serine proteases, subtilase domain profile. 107 616 - -
Lac5g0710 760 Pfam Subtilase family 133 608 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Lac5g0710 760 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 19 756 IPR045051 -
Lac5g0710 760 SUPERFAMILY PA domain 400 472 IPR046450 -
Lac5g0710 760 Gene3D Peptidase S8/S53 domain 136 629 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Lac5g0710 760 Pfam Peptidase inhibitor I9 18 103 IPR010259 -
Lac5g0710 760 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 14 103 IPR037045 -
Lac5g0710 760 PRINTS Subtilisin serine protease family (S8) signature 546 562 IPR015500 -
Lac5g0710 760 PRINTS Subtilisin serine protease family (S8) signature 133 152 IPR015500 -
Lac5g0710 760 PRINTS Subtilisin serine protease family (S8) signature 206 219 IPR015500 -
Lac5g0710 760 CDD Peptidases_S8_3 101 582 IPR034197 -
Lac5g0710 760 Pfam Fibronectin type-III domain 661 757 IPR041469 -
Lac5g0710 760 Gene3D - 341 485 - -
Lac5g0710 760 Gene3D - 633 759 - -
Lac5g0710 760 SUPERFAMILY Subtilisin-like 103 620 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Lac5g0710 760 CDD PA_subtilisin_like 347 477 - -
Lac5g0710 760 FunFam Subtilisin-like protease SBT1.5 633 760 - -
Lac5g0710 760 FunFam subtilisin-like protease SBT1.5 341 485 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac12g0418 Lac-Chr12:4687471 Lac5g0710 Lac-Chr5:8919702 4.00E-267 dispersed
Lac5g0701 Lac-Chr5:8748604 Lac5g0710 Lac-Chr5:8919702 6.50E-257 dispersed
Lac5g0710 Lac-Chr5:8919702 Lac5g0732 Lac-Chr5:9514990 5.00E-286 dispersed
Lac5g0706 Lac-Chr5:8861346 Lac5g0710 Lac-Chr5:8919702 2.10E-299 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac5g0710 - - - 0.0