Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac5g0732 ATGGATGCCTCCAACTTTTCTCTATTTCATTTGATATTCTTTCTTTTCTTTGTTCTGCAAACATCTACCATTGCCACCAAAAAGTCATACATTGTATACCTCGGTTCACATTCGCATGGTTTGAGTCCTACCTCATTGGATCTCGAACGTGCTACAGAATCTCATTATGACTTATTGGGATCCATGGTGGGAAGCAAAGAGATAGCGAAAGAATCCATTCTCTACTCATACAACAGATATATTAATGGTTTTGCTGCCATGCTCGATGAGAAACAAGCAACAGAACTTACAAGAAATCCAAATGTGATTTCGGTATTTGAAAGCCAGGAAAGACAATTGCACACAACAAGATCATGGAATTTTCTGGGAATAGACAGAAAAGAAGCAATTCCTTCAAAATCCATTTGGAATGTTACGAGGTTTGGTGAGGATACAGTTATAGCTAACTTTGACACAGGTGTTTGGCCAGAATCTAAGAGCTTCAGTGACGAAGGATATGGGCCTGTCCCTTCAAGGTGGTTGGGCACTTGTCAAAGAGATGCTGACCCTAACTTCCATTGCAATAGGAAGCTAATTGGAGCAAGGTTCTATAACAAGGCCTATGGTATGCTCAACGTCAGCTTTAATTCTTCAAGAGACCATGATGGCCATGGAACCCATACTTTATCCACAGCTGGTGGCAATTTTGTCTCTGGAGCTAATGTTTTTGGCAATGGCAATGGAACTGCCAAAGGTGGCTCACCTCGAGCCCGTGTTGCGTCCTACAAGGTCTGTTGGCCAGCAGAAGGTGGAGGGTGTTTTGACCCAGATATCTTAGCCGCCTTTGAAGATGCCATTGGCGACGGCGTTGATGTTATCTCAGTTTCTCTAGGTGGATTTGCCTCCGACTTTCTGAATGATGCGTTATCCATAGGAGCTTTCCATGCAGTTCAACAAGGCATCGTTGTCGTTTGCTCATCTGGGAACTCTGGACCAGCTCTTAGAACTGTATCAAATGTGTCACCATGGATGATAACTGTTGGAGCTAGTACCATGGATAGAGATTTTACCAATTTTGTGGTCCTTGGGAACAAAAAGCAACTCAAGGGTGCAAGCCTTTCTTCTAAGGCATTGCCATTAAACAAGTTCTACCCCTTAATTACTGGTGTGGATGCGAAAGCCGACAATGTCTCCAATCGTGATGCGGAAATTTGTGATGATGGAACGCTTGATTCCACGAAGTTGAATGGGAAGATTGTGGTATGCCTTCGAGGGGTTAATTCAAGAGTGGCCAAAAGTTTTGTGGCTGCTCAGGCAGGGGCTGTTGGGATAATTCTAGTTAACGATGAGCAGAGTGGAAATGAGATTTTAGCTGATCCACACATCCTTCCAGCTTCTAATGTAAACTATAAAGATAGCATATATATCTCCCAGTACATCGACTCTACAGAGACACCAATGGCTTACATCAGTTCTGTGAGGACAACACTTGGAGTCAAGCCAGCCCCAGTAATGGCTGGTTTCTCAGCAAGAGGTCCTAATACAATCGAGGAGTCAGTCCTAAAGCCTGATATAATAGCACCAGGTGTGAATATAATTGCGGCTCACCCTGATGGAATACCATTGACAAATGTACCAGCTGATGATCGTCTAGCTCCTTTTAAGCTAGATTCTGGCACATCTATGGCCTGCCCCCATGTTGCTGGGATTGTAGGTCTCCTCAAAACCCTAAATCCCAAATGGAGTCCAGCATCCATTCAATCTGCAATCATGACCACAGCTAAAACAAGAGACAACAACTTGCATCCAATTCTAGATACCACCGGACTCAAAGCAAATCCATTGGCTTACGGCGCAGGACATGTTCAACCAAACAGCGCGATGGACCCTGGCCTTGTTTATGACATTACAATCGATGATTACCTCAATTTCTTGTGTGCTCGAGGCTACAATACAACCCAAATCAACAAATTCTCCAATAAGACATTCGTTTGCGATCAGTCATTCAAAGTGACAGATCTAAATTACCCTTCGATCTCAGTCACAGATATTAAAACGGGCCCTGTGACGATCAATCGAAAGGTGAAGAACGTGGGAAGTCCAGGGACATATGTTGCTCGAGTGAAGGCGCCTTTGGAAGTTTCAATCGCCATTGAGCCAAGTACATTGCAATTTACTACCATGGATGAAGAGAAGAGCTTCAAAGTTATGTTGCAGAGCACTGGAAAGGGAAATCCGCAGGGTTATGTGTTTGGGACATTGACATGGTCAGATGGCAAACACAAAGTTAGAAGTTCCATTGTTGTTAATATGGGGAAATAG 2301 43.63 MDASNFSLFHLIFFLFFVLQTSTIATKKSYIVYLGSHSHGLSPTSLDLERATESHYDLLGSMVGSKEIAKESILYSYNRYINGFAAMLDEKQATELTRNPNVISVFESQERQLHTTRSWNFLGIDRKEAIPSKSIWNVTRFGEDTVIANFDTGVWPESKSFSDEGYGPVPSRWLGTCQRDADPNFHCNRKLIGARFYNKAYGMLNVSFNSSRDHDGHGTHTLSTAGGNFVSGANVFGNGNGTAKGGSPRARVASYKVCWPAEGGGCFDPDILAAFEDAIGDGVDVISVSLGGFASDFLNDALSIGAFHAVQQGIVVVCSSGNSGPALRTVSNVSPWMITVGASTMDRDFTNFVVLGNKKQLKGASLSSKALPLNKFYPLITGVDAKADNVSNRDAEICDDGTLDSTKLNGKIVVCLRGVNSRVAKSFVAAQAGAVGIILVNDEQSGNEILADPHILPASNVNYKDSIYISQYIDSTETPMAYISSVRTTLGVKPAPVMAGFSARGPNTIEESVLKPDIIAPGVNIIAAHPDGIPLTNVPADDRLAPFKLDSGTSMACPHVAGIVGLLKTLNPKWSPASIQSAIMTTAKTRDNNLHPILDTTGLKANPLAYGAGHVQPNSAMDPGLVYDITIDDYLNFLCARGYNTTQINKFSNKTFVCDQSFKVTDLNYPSISVTDIKTGPVTINRKVKNVGSPGTYVARVKAPLEVSIAIEPSTLQFTTMDEEKSFKVMLQSTGKGNPQGYVFGTLTWSDGKHKVRSSIVVNMGK 766
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 9514990 9518326 - Lag0017816.1 Lac5g0732 607374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac5g0732 766 ProSitePatterns Serine proteases, subtilase family, serine active site. 552 562 IPR023828 -
Lac5g0732 766 FunFam Subtilisin-like protease SBT1.5 144 358 - -
Lac5g0732 766 SUPERFAMILY Subtilisin-like 113 625 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Lac5g0732 766 Pfam Fibronectin type-III domain 666 762 IPR041469 -
Lac5g0732 766 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 18 114 IPR037045 -
Lac5g0732 766 Pfam PA domain 394 465 IPR003137 -
Lac5g0732 766 FunFam Subtilisin-like protease SBT5.3 18 114 - -
Lac5g0732 766 CDD PA_subtilisin_like 353 483 - -
Lac5g0732 766 Gene3D Peptidase S8/S53 domain 144 634 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Lac5g0732 766 Gene3D - 346 490 - -
Lac5g0732 766 Gene3D - 638 764 - -
Lac5g0732 766 SUPERFAMILY PA domain 405 447 IPR046450 -
Lac5g0732 766 CDD Peptidases_S8_3 112 587 IPR034197 -
Lac5g0732 766 FunFam Subtilisin-like protease SBT1.5 638 765 - -
Lac5g0732 766 PRINTS Subtilisin serine protease family (S8) signature 213 226 IPR015500 -
Lac5g0732 766 PRINTS Subtilisin serine protease family (S8) signature 551 567 IPR015500 -
Lac5g0732 766 PRINTS Subtilisin serine protease family (S8) signature 142 161 IPR015500 -
Lac5g0732 766 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 30 760 IPR045051 -
Lac5g0732 766 Pfam Peptidase inhibitor I9 29 114 IPR010259 -
Lac5g0732 766 FunFam subtilisin-like protease SBT1.5 346 490 - -
Lac5g0732 766 Pfam Subtilase family 142 592 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Lac5g0732 766 ProSiteProfiles Serine proteases, subtilase domain profile. 118 621 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac5g0703 Lac-Chr5:8815119 Lac5g0732 Lac-Chr5:9514990 1.30E-284 dispersed
Lac5g0704 Lac-Chr5:8823980 Lac5g0732 Lac-Chr5:9514990 6.30E-268 dispersed
Lac5g0706 Lac-Chr5:8861346 Lac5g0732 Lac-Chr5:9514990 7.60E-262 dispersed
Lac5g0710 Lac-Chr5:8919702 Lac5g0732 Lac-Chr5:9514990 5.00E-286 dispersed
Lac5g0732 Lac-Chr5:9514990 Lac6g0258 Lac-Chr6:2099405 6.10E-159 dispersed
Lac5g0732 Lac-Chr5:9514990 Lac5g0734 Lac-Chr5:9543800 0.00E+00 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac5g0732 - - - 0.0