Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac5g0734 ATGGCTGCCTTCAATCTTTCTCCATCTTACATTGTTTACTTGGGGTCGCATTCTCATGGTTTGCGTACTTTCTCGTTAAATCCTCGACATGTACTACAGTCTCATCATGATTTATTAGCATCGGTGTGTGGAAGCAAAAAGATAGCCAGAGAAGCCATTTTCTACTCATACAACAGACACATCAATGGCTTTGCTGCTATGCTTGATGAAAAGGAAGCAGCAGATCTTGCAAGGACTCCAAATGTCATTTCAGTTTTTGAAAGTCAAGCAAGAAAATTGCATACGACACGATCATGGGACTTTCTCGGAATGAAAGAACATGAAGAAGTTCCTTCAAACTCCATTTGGAACGCTGCGAGATTTGGTGAAGATATAATTATAGCTAACTTCGACACAGGTGTTTGGCCAGAATCTAAGAGCTTTAGTGATGATGGGTATGGACCTGTCCCCTCAAGGTGGAGAGGAACTTGTCAAAGTGATACAGACCCCAACTTCCATTGCAACAGGAAGTTGATTGGAGCAAGATTCTTCAACAAAGGCTATGGTGAACTCAGTGTGACCTTCAATTCTTCAAGAGACCATGATGGCCATGGAACCCACACTTTATCCATAGCTGGTGGTAATTTCATCCCTGGAGCTAATGTTTTGGGCATAGGCAATGGAACTGTCAAAGGTGGCTCCCCTCGAGCCCGTGTCGTGTCCTACAAGGTTTGTTGGCCAGCACCAGCAGAAATTGGTGAGTGTATGGATCCAAATAACCTGGCTGCCTTTGATGCTGCAATTAGCGATGGCGTTGACGTTCTCTCTCCATCGGTGGAGAGCCAAAGAGTTTTTAATGATGCAATCTCTGTAGGAGCCTTCCATGCAGTTCAACAAGGCATTGTTGTTGTTTGCTCAGCTGGAAACTTCGGACCAACTCCTGGGACTGTATCAAATGTGTCACCATGGATTCTAACTGTTGGAGCTAGTACCATAGATAGGGATTTCACCAACTTTGTGGTTCTTGGGAACAATAAGAAATTCAAGGGTACAAGCTTATCTTACAAGGCACTTCCACTTAACAAGTTCTACCCTTTAATCAATGCCGTGGATGCAATAGCCAACAATGTCTCTAACAGTGATGCGGAAACTTGTAGTCCGGGATCGCTTGATGCCACGAAGTTGACCGGGAAGATTGTGGTTTGCCTTCGAGGGGATATTGCAAGAGTGGACAAGGGCTATGTAGTTGCCAAAGCAGGGGCTGTTGGGATGATTTTGGTTAACGATGAGAAAAGTGGGAATGCAATTATATCTGATATGCACATCCTTCCAGCTACCCATGTAACCTACGATGACAGCATATCCATCTTCCAATACATCAATTCTACAAAGACACCAATGGCTTACATCAGTTCTGTGACGCCAGAACTAGAAATCAAACCATCTCCAGTAATGGCTGCTTTCTCATCAAGAGGCCCTAGTATAATCGAGGAGTCAATCCTTAAGCCTGATATAACAGCACCGGGTGTGAATATAATGGCAGCTTACCCCGATGGACTTCCATTGGAAAATATAGATTCTGACGATCATCGAGCTCCTTTTAAGATAGATTCTGGCACATCCATGGCCTGCCCCCATGTTGCTGGCGTTGCAGGCCTTCTCAAAGCCCTAAATCCCAAATGGAGTCCAGCTGCCATCAAATCTGCAATCATGACCACAGCAAAAACAACGGACAACACATTACATCCAATTCTAGACTACACCGGATTCCAAGCAACTCCATTGGCATATGGCGCCGGACATATTCATCCAAATAGTGCAATGGACCCTGGCCTGGTTTACGACATTACAATCGACGATTACCTCAATTTCTTGTGTGCAAGAGGCTACAACGAAACGGAAATCCAGATAATATCGAAGAAGTTGTTTGTTTGCAATCAGTCATTCAAAGTGACGGATCTGAATTACCCTTCGATCTCAGTGACGGATCTGAAAACGGGCCCTGTGACGATCAATCGAAAATTGAAGAACGTGGGAAGTCCAGGGATGTATGTTGCTCGAGTGAAGGCGCCTTCGGAAGTTTCCATCACGATTGAGCCAAGCTCACTGCAATTTACTGCCGTGGATGAAGAGAAGAGCTTCAAGGTGTTGTTGCAGAGGACTGGAAAGGGAAGGCAGCGGGATTATGTGTTTGGATCATTAGAATGGTCTGATGGTAAACACAATGTTCAAAGCCCCATTGCTGTGAATTTAGGGGAATAG 2241 44.67 MAAFNLSPSYIVYLGSHSHGLRTFSLNPRHVLQSHHDLLASVCGSKKIAREAIFYSYNRHINGFAAMLDEKEAADLARTPNVISVFESQARKLHTTRSWDFLGMKEHEEVPSNSIWNAARFGEDIIIANFDTGVWPESKSFSDDGYGPVPSRWRGTCQSDTDPNFHCNRKLIGARFFNKGYGELSVTFNSSRDHDGHGTHTLSIAGGNFIPGANVLGIGNGTVKGGSPRARVVSYKVCWPAPAEIGECMDPNNLAAFDAAISDGVDVLSPSVESQRVFNDAISVGAFHAVQQGIVVVCSAGNFGPTPGTVSNVSPWILTVGASTIDRDFTNFVVLGNNKKFKGTSLSYKALPLNKFYPLINAVDAIANNVSNSDAETCSPGSLDATKLTGKIVVCLRGDIARVDKGYVVAKAGAVGMILVNDEKSGNAIISDMHILPATHVTYDDSISIFQYINSTKTPMAYISSVTPELEIKPSPVMAAFSSRGPSIIEESILKPDITAPGVNIMAAYPDGLPLENIDSDDHRAPFKIDSGTSMACPHVAGVAGLLKALNPKWSPAAIKSAIMTTAKTTDNTLHPILDYTGFQATPLAYGAGHIHPNSAMDPGLVYDITIDDYLNFLCARGYNETEIQIISKKLFVCNQSFKVTDLNYPSISVTDLKTGPVTINRKLKNVGSPGMYVARVKAPSEVSITIEPSSLQFTAVDEEKSFKVLLQRTGKGRQRDYVFGSLEWSDGKHNVQSPIAVNLGE 746
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 9543800 9547022 - Lag0017818.1 Lac5g0734 607376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac5g0734 746 ProSiteProfiles Serine proteases, subtilase domain profile. 98 601 - -
Lac5g0734 746 Gene3D - 618 744 - -
Lac5g0734 746 FunFam Subtilisin-like protease SBT1.5 124 339 - -
Lac5g0734 746 Pfam Fibronectin type-III domain 646 742 IPR041469 -
Lac5g0734 746 FunFam subtilisin-like protease SBT1.5 326 469 - -
Lac5g0734 746 PRINTS Subtilisin serine protease family (S8) signature 122 141 IPR015500 -
Lac5g0734 746 PRINTS Subtilisin serine protease family (S8) signature 531 547 IPR015500 -
Lac5g0734 746 PRINTS Subtilisin serine protease family (S8) signature 193 206 IPR015500 -
Lac5g0734 746 FunFam Subtilisin-like protease SBT5.3 1 94 - -
Lac5g0734 746 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 5 94 IPR037045 -
Lac5g0734 746 Gene3D Peptidase S8/S53 domain 124 614 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Lac5g0734 746 SUPERFAMILY Subtilisin-like 93 605 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Lac5g0734 746 CDD PA_subtilisin_like 333 463 - -
Lac5g0734 746 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 10 740 IPR045051 -
Lac5g0734 746 CDD Peptidases_S8_3 92 567 IPR034197 -
Lac5g0734 746 SUPERFAMILY PA domain 386 456 IPR046450 -
Lac5g0734 746 FunFam Subtilisin-like protease SBT1.5 618 745 - -
Lac5g0734 746 Pfam Subtilase family 122 574 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Lac5g0734 746 Pfam PA domain 374 446 IPR003137 -
Lac5g0734 746 ProSitePatterns Serine proteases, subtilase family, serine active site. 532 542 IPR023828 -
Lac5g0734 746 Gene3D - 326 470 - -
Lac5g0734 746 Pfam Peptidase inhibitor I9 9 94 IPR010259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac5g0734 Lac-Chr5:9543800 Lac6g0258 Lac-Chr6:2099405 1.20E-159 dispersed
Lac5g0732 Lac-Chr5:9514990 Lac5g0734 Lac-Chr5:9543800 0.00E+00 proximal
Lac12g0418 Lac-Chr12:4687471 Lac5g0734 Lac-Chr5:9543800 1.30E-244 transposed
Lac1g3457 Lac-Chr1:53945135 Lac5g0734 Lac-Chr5:9543800 4.20E-163 transposed
Lac2g0130 Lac-Chr2:992739 Lac5g0734 Lac-Chr5:9543800 1.10E-24 transposed
Lac2g2441 Lac-Chr2:35412559 Lac5g0734 Lac-Chr5:9543800 3.60E-68 transposed
Lac2g2442 Lac-Chr2:35422186 Lac5g0734 Lac-Chr5:9543800 1.00E-158 transposed
Lac5g0642 Lac-Chr5:7928245 Lac5g0734 Lac-Chr5:9543800 5.20E-283 transposed
Lac5g3083 Lac-Chr5:48529492 Lac5g0734 Lac-Chr5:9543800 2.40E-134 transposed
Lac6g0828 Lac-Chr6:7128274 Lac5g0734 Lac-Chr5:9543800 3.30E-147 transposed
Lac10g1458 Lac-Chr10:13970144 Lac5g0734 Lac-Chr5:9543800 8.20E-12 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac5g0734 - - - 0.0