Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lac5g0759 ATGCAGTCTATTAATGCTGTTGAACATGAATTACTTTCTGGAAGGTTTCAATTTAGTAACAGAATGTTGGAGAGTTTTGCTTACAAGAGCGTGAAGATTGTAGTCTTCTCAAATAAACTCAACTTCCTTATGCCTTTTGGGCCTCTAGCAATTCTTGTGGATAAGTTGGCTGGTCATAATAGTTGGGTCTTCTTCCTAAGTCTATTGGGTATCATACCGTTGGCTGAGCGGTTAGGTTATGCCACAGAGCAGCTGGCTTTTTACACAGGACCTACAGTTGGGGGTCTACTAAATGCTACTTTTGGAAATGCAACAGAACTAATTATATCAATTTTTGCACTGAAAAATCAAATGATACGTGTTGTTCAGCTATCATTACTAGGCTCAATTCTGTCGAACATGTTGCTGGTGCTTGGTTGTGCATTCTTCTGTGGTGGGATTGTTTTCTATAAAAAGGAACAGACTTTTAACAAGGCAACTGCTGTTGTCAACTCAGGATTGTTGTTAATGGCTGTCATGGGCCTGCTTTTTCCTGCTCTTCTCTACTACACCCACAGTGAAGCCCATTTTGGGAAGTCGGAATTGGCACTCTCCAGATTCAGTAGTTGCATTATGCTTCTGGCTTATGCTGCTTATCTTTTCTTCCAATTGAAAAGTCAGAGGAATCTTTATTCTTCTGTTTATGAGGAAGAAACTGAGAGCGAAGAAAGCTCAGATGAAGATGAAGCTCCTGAGATCTCCAAGTGGGAATCAGTTATCTGGTTATTAATTTTGACGGCCTGGATTTCTGTTTTATCAGAATACTTGGTTGATGCAATCGAAGTTGCATCTGTATCATTGAAAATCCCAGTGACGTTTATTAGTGTTATTCTGCTTCCTATTGTGGGGAATGCTGCTGAGCATGCAAGCGCTATTATGTTTGCTATGAAAGATAAGCTTGATATTTCTCTGGGTGTAGCTATCGGATCATCAACCCAGATCTCTATGTTCGGTATTCCTTTCTGTGTGGTAACTGGGTGGATTATGGGACAACCGATGGACTTGAACTTTAAACTCTTCGAGACGGCGACACTTTTTATAACTGTAATAGTAGTAGCTTTCTTGCTGCAGGAAGGAACTTCAAATTACTTCAAGGGACTGATGCTTATCCTTTGTTATCTGATAGTCGCAGCTAGTTTTTTCGTGCACGTCGATCCTCCTCTACCTGAGAACAAACTGGGGAGTTTGAAAGCATAG 1236 40.61 MQSINAVEHELLSGRFQFSNRMLESFAYKSVKIVVFSNKLNFLMPFGPLAILVDKLAGHNSWVFFLSLLGIIPLAERLGYATEQLAFYTGPTVGGLLNATFGNATELIISIFALKNQMIRVVQLSLLGSILSNMLLVLGCAFFCGGIVFYKKEQTFNKATAVVNSGLLLMAVMGLLFPALLYYTHSEAHFGKSELALSRFSSCIMLLAYAAYLFFQLKSQRNLYSSVYEEETESEESSDEDEAPEISKWESVIWLLILTAWISVLSEYLVDAIEVASVSLKIPVTFISVILLPIVGNAAEHASAIMFAMKDKLDISLGVAIGSSTQISMFGIPFCVVTGWIMGQPMDLNFKLFETATLFITVIVVAFLLQEGTSNYFKGLMLILCYLIVAASFFVHVDPPLPENKLGSLKA 411
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
5 9927454 9930900 + Lag0017843.1 Lac5g0759 607401
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lac5g0759 411 Gene3D - 238 395 IPR044880 -
Lac5g0759 411 Gene3D - 91 230 IPR044880 -
Lac5g0759 411 FunFam Vacuolar cation/proton exchanger 239 395 - -
Lac5g0759 411 FunFam Vacuolar cation/proton exchanger 91 230 - -
Lac5g0759 411 NCBIfam calcium/proton exchanger 44 394 IPR004798 GO:0006816(InterPro)|GO:0015369(InterPro)
Lac5g0759 411 Pfam Sodium/calcium exchanger protein 251 393 IPR004837 GO:0016020(InterPro)|GO:0055085(InterPro)
Lac5g0759 411 Pfam Sodium/calcium exchanger protein 62 217 IPR004837 GO:0016020(InterPro)|GO:0055085(InterPro)
Lac5g0759 411 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 23 399 IPR004713 GO:0006812(InterPro)|GO:0006874(PANTHER)|GO:0008324(InterPro)|GO:0009705(PANTHER)|GO:0015369(PANTHER)|GO:0016020(InterPro)|GO:0070588(PANTHER)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac1g1873 Lac-Chr1:40454437 Lac5g0759 Lac-Chr5:9927454 1.30E-95 dispersed
Lac5g0759 Lac-Chr5:9927454 Lac9g1936 Lac-Chr9:39140096 9.90E-164 dispersed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac5g0759 K07300 - csv:101205761 635.565