Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac5g0771 ATGGTTTCCAACGAAACAACCATGAGTTTCTCCTCCTCCAACGGCGACGACCAAGAACACGAACACTTCGCTTACGCCGTGCATCTGATTACCTTATCGATGCTGCCGATGACACTCCAAGCAGCCTTTGAGCTCGGTGTGTTTGAGATCTTGGCAAAGGCTGGCCATGGGGCCAAGCTCTCTCCGACCGAGATAGCGGCCGAGATAAATACGACCAACTCGGATGCAGCGTCGATGATTGATCGGATCCTGAGGCTTTTGGCTAGCCACTCCGTGGTCGCCTGCTCTGTGGTCACTGATGAACATGGAAATCTACACAGACTCTATAGCCTTACGCCAGTTTCTAAGTATTATGTTCGCAATGAAGATGGTGTGTCGTTCGGTCCCGGCTTAGTGTTGGCTCAAGACAAAGTCTTTCTCGATTGCTGGAGTGAGTTGAAGAATTCAGTGATGGAAGGAGGAGTTGCTTTCAACAGGGCTCATGGAGGAACTCGTGTGTTTGAGTACTCAGGGCTAGACCAAAGATTTAACAAACTCTTCAACACTTCAATGAGAAACCACACCACCATGTCCATCAAGAAAATTGTCAAGTCCTACAAAGGCTTTGCACACCTCAAGCACCTAGTTGATGTTGGTGGTGGCGTAGGGGCCAACCTTCAAATCATCACTTCTACCTACCCTTCAATCAAGGGCATCAATTTCGACTTACCTCATGTCGTCCGTGATGCCCCTTCCTATCCTGGTGTTGAACATGTGGGAGGAGACATGTTTGAGAGCGTTCCAAAAGGAGATGCTATTTTCATGAAGTGGATACTTCATGATTGGAGTGATGATCATTGCGTGAAGTTGTTGAAGAATTGCTATGCTGCAATTCCAAATGATGGAAAGGTAATCATAGTGGATGCAGTGCTTCCAACCACGATTGAGACCACAAGTGCAGTGAAATCCATCACCCAAGGTGATGTATTTATGATGACTCTAAATTCAGGAGGAAAGGAGCGAACTCGTGATGAATTTAAAGCTCTCGCAACCAAAGCTGGATTTAAACACATCAAATTCCAGTGTTATGTCTTTAATCTCTGGGTTATGGAGCTTTCTAAATGA 1104 46.2 MVSNETTMSFSSSNGDDQEHEHFAYAVHLITLSMLPMTLQAAFELGVFEILAKAGHGAKLSPTEIAAEINTTNSDAASMIDRILRLLASHSVVACSVVTDEHGNLHRLYSLTPVSKYYVRNEDGVSFGPGLVLAQDKVFLDCWSELKNSVMEGGVAFNRAHGGTRVFEYSGLDQRFNKLFNTSMRNHTTMSIKKIVKSYKGFAHLKHLVDVGGGVGANLQIITSTYPSIKGINFDLPHVVRDAPSYPGVEHVGGDMFESVPKGDAIFMKWILHDWSDDHCVKLLKNCYAAIPNDGKVIIVDAVLPTTIETTSAVKSITQGDVFMMTLNSGGKERTRDEFKALATKAGFKHIKFQCYVFNLWVMELSK 367
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 10153641 10159694 - Lag0017855.1 Lac5g0771 607413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac5g0771 367 FunFam Caffeic acid O-methyltransferase 119 367 - -
Lac5g0771 367 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 124 364 IPR029063 -
Lac5g0771 367 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 27 367 IPR016461 GO:0008168(InterPro)
Lac5g0771 367 Pfam Dimerisation domain 37 88 IPR012967 GO:0046983(InterPro)
Lac5g0771 367 FunFam Caffeic acid 3-O-methyltransferase 3 118 - -
Lac5g0771 367 Gene3D - 5 118 IPR036388 -
Lac5g0771 367 SUPERFAMILY Winged helix DNA-binding domain 17 121 IPR036390 -
Lac5g0771 367 Pfam O-methyltransferase domain 143 349 IPR001077 GO:0008171(InterPro)
Lac5g0771 367 PIRSF O-mtase 3 367 IPR016461 GO:0008168(InterPro)
Lac5g0771 367 Gene3D Vaccinia Virus protein VP39 119 367 IPR029063 -
Lac5g0771 367 PANTHER O-METHYLTRANSFERASE 24 354 IPR016461 GO:0008168(InterPro)|GO:0008171(PANTHER)|GO:0008757(PANTHER)|GO:0019438(PANTHER)|GO:0032259(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac5g0771 Lac-Chr5:10153641 Lac5g0781 Lac-Chr5:10402932 3.50E-160 dispersed
Lac5g0766 Lac-Chr5:10103739 Lac5g0771 Lac-Chr5:10153641 2.20E-33 proximal
Lac5g0770 Lac-Chr5:10134536 Lac5g0771 Lac-Chr5:10153641 6.50E-47 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac5g0771 K13066 - csv:101214916 549.28