Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac5g0787 ATGGCTTCCACGGCGGAGGAAACAACAACCATCACTTCCTCCGACGACGAGGACCAAGAAGAACATCACTACGCTTATGCCGTGCAGCTACTTACCTTGTCGGTGCTGCCGATGACACTGCAAACAGCCTTCGAGCTCGGCTTGTTTGAGATAATGGCCAAGGCAGGCGACGGGGCCGAGCTCTCTCCGGTGGAGATAGCTGCTCAGATAACCACTACGAACCCCGATGCGGTGTCGATGGTTGATCGGATCTTAAGGCTTCTAGCAAGCCATGCGGTGGTTGGTTGCTCTGTGGCCTTTGATGAAAATGGGAATCTGCAGAGACTCTATAGCCTCACACCGGTTTCTAAGTATTATGTTATTAATGAACATGGAGTGTCGTTCGGTCCTCCTTTATCGTTGATTCAAGATAAAGTCTTTCTCCATAGCTGGAGTGAGCTGAAGAATGCAGTTATTGAAGGAGGAGTAGCTTTCAACAGGGCTCATGGGGGAGTTCATGCCTTTGAATATCCAGGCTTGGATCCAAGATTTAATCAAGTTTTCAACAATGCAATGAAAAATCACACCACAATGTCCATCAACAAAATAGTCAAGTCCTACAAGGGATTTGAAAACATGAAGCAACTAGTTGATGTTGGTGGTGGCGTAGGTGTCACCCTTCAAATCATCACTTCTTCGTATCCTTCAATCAAAGGCATCAACTTCGACTTGCCTCATGTCATTCAAGATGCCCCTTCCTATCCCGGTCGTTATGATATGTCTGTCATTATTTTGACTGGGGAGGGAAAAGCATGTTAG 798 46.74 MASTAEETTTITSSDDEDQEEHHYAYAVQLLTLSVLPMTLQTAFELGLFEIMAKAGDGAELSPVEIAAQITTTNPDAVSMVDRILRLLASHAVVGCSVAFDENGNLQRLYSLTPVSKYYVINEHGVSFGPPLSLIQDKVFLHSWSELKNAVIEGGVAFNRAHGGVHAFEYPGLDPRFNQVFNNAMKNHTTMSINKIVKSYKGFENMKQLVDVGGGVGVTLQIITSSYPSIKGINFDLPHVIQDAPSYPGRYDMSVIILTGEGKAC 265
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 10494577 10495633 - Lag0017871.1 Lac5g0787 607429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac5g0787 265 Pfam Dimerisation domain 38 89 IPR012967 GO:0046983(InterPro)
Lac5g0787 265 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 28 265 IPR016461 GO:0008168(InterPro)
Lac5g0787 265 Gene3D - 3 119 IPR036388 -
Lac5g0787 265 Gene3D Vaccinia Virus protein VP39 121 259 IPR029063 -
Lac5g0787 265 Pfam O-methyltransferase domain 144 247 IPR001077 GO:0008171(InterPro)
Lac5g0787 265 SUPERFAMILY Winged helix DNA-binding domain 18 120 IPR036390 -
Lac5g0787 265 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 131 250 IPR029063 -
Lac5g0787 265 FunFam Caffeic acid 3-O-methyltransferase 3 119 - -
Lac5g0787 265 PANTHER O-METHYLTRANSFERASE 25 246 IPR016461 GO:0008168(InterPro)|GO:0008171(PANTHER)|GO:0008757(PANTHER)|GO:0019438(PANTHER)|GO:0032259(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac5g0787 Lac-Chr5:10494577 Lac5g3088 Lac-Chr5:48558109 1.30E-63 dispersed
Lac5g0781 Lac-Chr5:10402932 Lac5g0787 Lac-Chr5:10494577 4.30E-126 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac5g0787 K13066 - csv:101205290 369.007