Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac5g1007 ATGGCCGAGACGTTTGTTGCAATAAAAGAGCCTCGTCCTGTAGTTAGAAAGTTTCTCTCTAGACCTCAACATGAAGGCCTTGGCGCTGTTGTAAGAAGAAGCATCGGCAGGTTTGAGCTCAAATACTTTGATCCTTTTCTCGTTCTCGATGAGTTTTCTGTTACTGCGCCTGCTGGGTTCCCTGATCATCCACATAGGGGGTTTGAGACCGTCACCTACATGTTGAAGGGAGCAATGACACATGAAGATTTCAAAGGACATAAAGGAACAATTGGAGCTGGTGACTTGCAATGGATGACTGCAGGAAAAGGCATTGTTCACTCTGAAATGCCTGCATCCCATGGCACCCAACATGGCTTACAACTTTGGATCAATCTCTCTTCCAAACACAAAATGATGGAGCCAAGGTATCAGGAAATACGCAGCAAGGACATAGTAGAAGCTACAAAAGATGGAGTAAAAGTGAGAGTGATAGCAGGGGAAGCCTTGGGAGCAAAATCCCCAATCTACACCACAACTCCGACTATGTATTTGGACTTCACTCTCGCCCCAGGATCTCACATTGAGCAGCCGATCCCGACGGGGTGGAATGCGTTCGTGTACGTGCTTGAAGGCGAGGGCGGAGTGTTCGGGAGCTCGAAATCAATGCCCGTTACACCACATCACCTTCTTTTGTTAGGGAGTGGGGATGGGTTGGAGGCTTGGAACAAGTCCTCATCAAAGGCTCTCAGGTTCATATTGGTTGGGGGTCAGCCATTGAATGAGAGTGTTGTGCAGTTGGGGCCATTTGTAATGAACACTCAAGAAGAGATTGACCAAACCATTGAGGATTTTGAGAATTGCACAAATGGCTTTGAGAGAGCAACGCATTGGAGATCACAAGCTTAG 888 47.3 MAETFVAIKEPRPVVRKFLSRPQHEGLGAVVRRSIGRFELKYFDPFLVLDEFSVTAPAGFPDHPHRGFETVTYMLKGAMTHEDFKGHKGTIGAGDLQWMTAGKGIVHSEMPASHGTQHGLQLWINLSSKHKMMEPRYQEIRSKDIVEATKDGVKVRVIAGEALGAKSPIYTTTPTMYLDFTLAPGSHIEQPIPTGWNAFVYVLEGEGGVFGSSKSMPVTPHHLLLLGSGDGLEAWNKSSSKALRFILVGGQPLNESVVQLGPFVMNTQEEIDQTIEDFENCTNGFERATHWRSQA 295
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 15945760 15947358 - Lag0018091.1 Lac5g1007 607649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac5g1007 295 PANTHER PIRIN-RELATED 8 294 IPR012093 -
Lac5g1007 295 Gene3D Jelly Rolls 25 279 IPR014710 -
Lac5g1007 295 PIRSF Pirin 10 292 IPR012093 -
Lac5g1007 295 Pfam Pirin 31 124 IPR003829 -
Lac5g1007 295 Gene3D Jelly Rolls 146 253 IPR014710 -
Lac5g1007 295 SUPERFAMILY RmlC-like cupins 13 293 IPR011051 -
Lac5g1007 295 CDD cupin_pirin_C 174 252 - -
Lac5g1007 295 Pfam Pirin C-terminal cupin domain 177 284 IPR008778 -
Lac5g1007 295 FunFam pirin 25 162 - -
Lac5g1007 295 CDD cupin_pirin_N 29 126 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac2g1468 Lac-Chr2:12608190 Lac5g1007 Lac-Chr5:15945760 2.60E-137 dispersed
Lac5g1007 Lac-Chr5:15945760 Lac7g1097 Lac-Chr7:9959702 3.90E-114 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac5g1007 K06911 - csv:101204082 509.22