Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lac5g1340 | ATGACGCACGAGGAATCCCTTTTTCCACATCGAGAATATATTATCCAGATAGCCATACAACTCAATTTCATCGTGGCCGTTCATATTCTCAACAACACTCCATCCCCACCGTCCATTCTCTCCACCGTTCGCACCAAACACCACTCTATATATACTGCACTGACCCACTCCGTTCTCTTCACGCTTTCCATTCGCATTCTGCTTCGACTTCGCCTTCGCCTTCAGATTTTGGGTGCCTTCAGTTACCACCAAGCAAATTACATGGTTGATCTAGACGTCCAGATTCCAACTGCTTTTGATCCCTTTGCCGACGCCAAGGACTCGGATGCCCCGGGAAGCAAAGAGTACGTCCATATAAGGGTCCAACAGAGGAATGGGAAGAAGTGTCTGACAACAGTTCAAGGGCTTAAGAAGGAGTTCAGCTATGATAAGATCCTCAAGGACCTGAAGAAGGACTTCTGTTGCAATGGGAATGTTGTTCAGGACAAAGAGATGGGGAAGATAATCCAACTCCAAGGCGATCAGCGCAAGAACGTCTCTCAGTTCCTCGTTCAGGCCGGCCTCGTTAAGAAGGATCAAATCAAGATACATGGTTTTTGA | 600 | 47.17 | MTHEESLFPHREYIIQIAIQLNFIVAVHILNNTPSPPSILSTVRTKHHSIYTALTHSVLFTLSIRILLRLRLRLQILGAFSYHQANYMVDLDVQIPTAFDPFADAKDSDAPGSKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILKDLKKDFCCNGNVVQDKEMGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF | 199 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 26557174 | 26558869 | - | Lag0018424.1 | Lac5g1340 | 607982 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lac5g1340 | 199 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 | 88 | 199 | - | GO:0003723(PANTHER) | |
Lac5g1340 | 199 | NCBIfam | translation initiation factor SUI1 | 92 | 199 | IPR005874 | GO:0003743(InterPro) | |
Lac5g1340 | 199 | Gene3D | - | 78 | 199 | - | - | |
Lac5g1340 | 199 | CDD | eIF1_SUI1 | 115 | 198 | IPR005874 | GO:0003743(InterPro) | |
Lac5g1340 | 199 | Pfam | Translation initiation factor SUI1 | 114 | 188 | IPR001950 | GO:0003743(InterPro)|GO:0006413(InterPro) | |
Lac5g1340 | 199 | ProSiteProfiles | Translation initiation factor SUI1 family profile. | 117 | 187 | IPR001950 | GO:0003743(InterPro)|GO:0006413(InterPro) | |
Lac5g1340 | 199 | FunFam | Eukaryotic translation initiation factor SUI1 | 89 | 199 | - | - | |
Lac5g1340 | 199 | SUPERFAMILY | eIF1-like | 86 | 199 | IPR036877 | GO:0003743(InterPro)|GO:0006413(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lac12g0614 | Lac-Chr12:6537469 | Lac5g1340 | Lac-Chr5:26557174 | 7.80E-41 | dispersed | |
Lac12g0615 | Lac-Chr12:6542266 | Lac5g1340 | Lac-Chr5:26557174 | 8.70E-46 | dispersed | |
Lac2g1401 | Lac-Chr2:11858863 | Lac5g1340 | Lac-Chr5:26557174 | 2.70E-55 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lac5g1340 | K03113 | - | csv:101214921 | 225.713 |