Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac5g1439 ATGCAATTGCCAATGCGAGATTTCATCTCCGCTTCCTTCCTTATTTCCCTTCTTGTTTTTTCCCAATTTTCCCTCTCTTCTGCACAAGACTACATCATCGGCGACCCCACCAAGCCCGCCGCCGCCGCTGACGACGACGCCGATGCCGACGCGAAGCCGGCAGCGCCACCGCCGGAGCAGAGCGACTGCAATGGCATATTCTTGTCCTACACTTTCATCTCGCGTGAGAAGGAGCTGCCCCGTTTGAAAAATGCGACGGCGCAGGCTTGGGCGTTCAAATCGCAGGTGCTGATTCTGAACGGCGGAACGACGGAGCTCAAGGCCTGGAAGGTGTATGTTGGATTTCACAACAAGGAGATTCTGGTCTCGATCACCGGCGCCGTCGTGGAGGAAGGCTCGGATTTCCCTGTGGACGTTGGGAATGGGACGACTTTGACTGGGTATCCGATGACGGATCTGAAAACGTCGATTGAAACCGCCGGAGATATCAATCAGATTCAGGCGACGGTGGACATCGTTGGATCGCAGTTCGGCATCAAGCCGCCTGGTGTTCCAATGCCTAAGACGATTCGGCTTGCTAACGACGGATTTAAGTGCCCTGCGCCTCGTCGTCGCGGTAAAAGAACAATGCACGTATGCTGCAAAAAGGATCCAAAGTATAAGGTGAAAGAACCGAAGAAAACAAAATTCTTGGCTCGACGAAATGGAGATCTGTCACTGTCGTATGATGTGATGCAAGCTTATGGAAACAACTATATGGCTCAAGTGACAATTGACAACAACAACCCGCTGGGGCGATTGGATCACTGGAACTTGACCTGGGAATGGATGAGAGGAGAGTTCATTCAAAGCATGAGAGGAGCTTACACTCATACTAGAGACTTGGCTCAATGCGTTTACGGCACTGCAGGCCAATACTATCAAGATTTCGACTTCTCTCAGGTCCAGAGTTGTGATAAGAGCCCCATTATCGCAGATCTTCCAGCCGATCGAGCCAACGATGATAAGATCGGCAAATTGCCATTTTGCTGTAGGAATGGAAGCTTGTTGCCAACATTGATGGATGAGAGCAAATCAAGGTCTGTTTTTCAGCTAACAGTCTTTAAGCTTCCACCAGACATGAACCGAACCGCTCTTACTCCACCGCAGAAATGGAAGATCTCCGGTCTTCTCAACCCCAAATATGTATGTGGGGCTCCCATCCGAGTCGATCCGACCAAGTTTCCAGACCCGACCGGCCTCCAGGCCACGAGCACGGCCATCGCAAGTTGGCAAGTTGTGTGCAACATTACAAGGCCAAAGGTGCAGCAATCAAAATGTTGTGTTTCATTTTCAGCATATTACAATGACTCTGTAATTCCTTGCAACACTTGTGCCTGTGGGTGTGATGACACTGACACTTGCAATCCAAATGCACGTGCAATGATGCTCCCTCCAGAAGCACTTTTGGTGCCATTTAAGAACAGGACTGCAAAGGCAAGAGCTTGGGCTAAAATTAAACACTTCCCAATTCCAAAGAGGATGCCTTGCCCTGATAACTGTGGAGTTAGCCTCAATTGGCATATTAACTCTGACTATACCAATGGATGGTCAGCAAGAATAACACTGTTCAACTGGGAAGATTATCCATTTGAGGATTGGTTTACTGCTATTCAGTTGAACAAGGCCGGTCAGGGTTACGAAAACGTTTATTCCTTCAACGGAACCAAGCTTCCCCACGTCAAAAATACCATCTTCCTCCAAGGCTTGCCTGGTTTATCATACTTGATGGGAGAGGTCAATGGAACCAATCCTAAATCCGATCCAAGAGTTCCAGGAAAGCAGCAATCCGTCATTTCTTTCACCAAGAAGGGCCTCCGCAACATCGACATACAAAAAGGTGACGGTTTCCCAACCAAAGTATTTTTCAATGGTGAAGAATGTGCACTTCCAAAGCATTTTCCCATTGCAAGTTCAGCCCACCGGCCTCGCCACGCTTTCGTGCCGCTTATCCTCATCTTAGCCATTACTTTCGCGCTCATAACAGATCGCTTCCATTGA 2040 48.82 MQLPMRDFISASFLISLLVFSQFSLSSAQDYIIGDPTKPAAAADDDADADAKPAAPPPEQSDCNGIFLSYTFISREKELPRLKNATAQAWAFKSQVLILNGGTTELKAWKVYVGFHNKEILVSITGAVVEEGSDFPVDVGNGTTLTGYPMTDLKTSIETAGDINQIQATVDIVGSQFGIKPPGVPMPKTIRLANDGFKCPAPRRRGKRTMHVCCKKDPKYKVKEPKKTKFLARRNGDLSLSYDVMQAYGNNYMAQVTIDNNNPLGRLDHWNLTWEWMRGEFIQSMRGAYTHTRDLAQCVYGTAGQYYQDFDFSQVQSCDKSPIIADLPADRANDDKIGKLPFCCRNGSLLPTLMDESKSRSVFQLTVFKLPPDMNRTALTPPQKWKISGLLNPKYVCGAPIRVDPTKFPDPTGLQATSTAIASWQVVCNITRPKVQQSKCCVSFSAYYNDSVIPCNTCACGCDDTDTCNPNARAMMLPPEALLVPFKNRTAKARAWAKIKHFPIPKRMPCPDNCGVSLNWHINSDYTNGWSARITLFNWEDYPFEDWFTAIQLNKAGQGYENVYSFNGTKLPHVKNTIFLQGLPGLSYLMGEVNGTNPKSDPRVPGKQQSVISFTKKGLRNIDIQKGDGFPTKVFFNGEECALPKHFPIASSAHRPRHAFVPLILILAITFALITDRFH 679
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 28836221 28838332 - Lag0018523.1 Lac5g1439 608081
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac5g1439 679 PANTHER COBRA-LIKE PROTEIN 7 16 674 - -
Lac5g1439 679 Pfam COBRA-like protein 252 431 IPR006918 GO:0010215(InterPro)|GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac2g1368 Lac-Chr2:11544127 Lac5g1439 Lac-Chr5:28836221 2.70E-300 dispersed
Lac5g1439 Lac-Chr5:28836221 Lac7g0923 Lac-Chr7:7737569 7.50E-209 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac5g1439 - - - 0.0