Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac5g1623 ATGGACTCTTTCTCTTCAACACTCGTTGCTTTTAACTTGGCTTTTCTTCTCTTCAGGTCTGTTACTGCCCTTGATTCCTTAACGGCTCAAAACCCATTTCTAAGAGATGGGCTTCGTCTGGTTTCCAGAAATGGAAACTTCGAACTGGGTTTCTTCAGTCCGGGTCTTTCCGGCGACCGTTACTTGGGGATCTGGTTCAAGGATCGGCGAGGTCCGACCTCCGTTTGGGTTGCGAACAGGAAAACCCCCATTAATGATTCGTCTGGTGTACTTGCGATGAACATTACAACAGGAAATCTTACACTCTATAGCCACAATTCCACTGCCATTGTTTGGTCCGCCAGGTTACTGAGAAAAGTCCCCAATGGGGCACTCCAACTATTGGACACTGGAAATCTTGTGCTGAGAAACGCGGAGGATGAAAATCCCCAAAACTACTCCTGGCAAAGCTTTGATTACCCAACTGACACTCTCTTGCCTGGAATGAAGCTGGGTTGGGACTTGAGAAATAACATTGATAGAAGATTAGAGGCTTGGAAGAATCCCAATGACCCATCTCCTGGAAACCTCAGTTGGAGGATGGAGCTTCATGAATATCCCGAGTCTGTTATGTGGAATGGTTCGAAAGAATACTTCAGGCATGGCCCATGGAATGGTGTGAGAGTCACTAGTAGACCACTAGGCATAGCTCCAATTCTGAACTTCAACTTCGTTTCAAATGACGATGAGGTTTACTACCAATACTCTGTTGTAAACAAGTCTCATACAGTGATGGTGGTGATGAACCAATCCAACTACATGCGCATAATGTACTTGTGGTCTGCAGCTGAAAGACAGTGGAGAGTTTACACTTCATTGCCAAGAGATTTCTGTGACAATTATGGCCTGTGTGGCCCCTATGGATATTGTGATATAAGGGTCACTCCATCTTGTAAATGTCTAGAAGGGTTTAAGCCAAGATCACCTGATAGTTGGAAGGCAGGGGAATTTGCGGACGGTTGTGAACGGAACAAGCTGATGAATTGTGGTAATGAAGTTGGGTTTGCACAATTCAACCAGCTGAAATTGCCAGACACAAAGCATACTTGGGTCAATAAAAGCATGAATCTTGAAGAATGCAAGCAAAAATGCTTGAGAAATTGCTCTTGTATGGCTTATGCAAATACAAATATCAGTGGCAGTGGTAGTGGCTGTGCCATATGGATTGGTGATCTAATTGACTTGAAATTGATCCCGGACGCAGGACAGGATTTATATGTCAGGATGCTAGCATCAGAATTAGTCAAGCATAGGGAGGCACACAAAACTGAAAGATTGAATCCTAGGGTGAAAATTGCTTTGGTTGCGATTGCCGTCGGTTTGGTTTTGGCTATCCTCTTCATATGCTTATACATTTTCAAAAAGAGATCAACCTTCAAAGATGACCATGAGAAAATAGAAGCTAAAGACCTGGAGCTTCCACTGTTTGATCTATCCTTGATTAATAGTGCCACAAATAACTTCTCGCTTAATAACAAGCTAGGAGAAGGTGGCTTTGGGCCAGTATATAAGGGTAAGCTTACAAATGGACAAGACATTGCAGTGAAGAGACTTTCACAGAGTTCTGGACAGGGAATGAATGAGTTTAAGAACGAAGTAATCCTAATTGCAAAACTTCAACATCGAAATCTTGTAAAGCTTCTTGGTTGCTGCATCCAAGGAGACGAGAAAATGCTAGTTTACGAGTATATGCCAAACAAAAGTTTGGATTTCTTTATATTTGATCGGACACAACGCCAATTTTTAGACTGGTCAAAACGATATCACATTATTTGTGGAATTGCTAGAGGACTCATGTATCTTCATCAAGATTCTAGATTGAGGATTATACATAGAGATTTAAAAGCAAGTAATGTTTTACTTGATATGGATATGAATCCAAAAATCTCTGATTTTGGTCTGGCTAAAACTTGCGGTGGGGATCAAACGGAAGGACGGACGATAAGAGTGGTTGGAACTTATGGATATATGGCACCGGAATATGCTTTTGATGGACAATTCTCAGTGAAATCTGATGCATTTAGTTATGGTATTTTGTTGTTGGAGATCATTAGTGGAAAAAGAAGTAGAAGTTTCTGCCACTCGACTGACCAAAATCTTATTGCATATGCATGGCGATTGTGGAAAGAAGGAAATCCAGAAGAATTGATCGACGATGCCATTCGAGAAACATGTACCCTCTCAGAGGTACTGAGATGTATCAATATTAGTTTGTTGTGTGTTCAACAGCATCCCAATGATCGACCCACAATGTCATCGGTGGTTATGATGTTAGGTTGTGAAATCCCTTTGTCACAACCAAAACAACCAGGATTTTTCGTACAAAATGAAGTCGTTGCAATGAATAATGGGTCGAGTAACGATAAATCAACTTCAGCTAATGAATTAACTATTACCCTCCCAGATCCCAGGTAA 2454 41.52 MDSFSSTLVAFNLAFLLFRSVTALDSLTAQNPFLRDGLRLVSRNGNFELGFFSPGLSGDRYLGIWFKDRRGPTSVWVANRKTPINDSSGVLAMNITTGNLTLYSHNSTAIVWSARLLRKVPNGALQLLDTGNLVLRNAEDENPQNYSWQSFDYPTDTLLPGMKLGWDLRNNIDRRLEAWKNPNDPSPGNLSWRMELHEYPESVMWNGSKEYFRHGPWNGVRVTSRPLGIAPILNFNFVSNDDEVYYQYSVVNKSHTVMVVMNQSNYMRIMYLWSAAERQWRVYTSLPRDFCDNYGLCGPYGYCDIRVTPSCKCLEGFKPRSPDSWKAGEFADGCERNKLMNCGNEVGFAQFNQLKLPDTKHTWVNKSMNLEECKQKCLRNCSCMAYANTNISGSGSGCAIWIGDLIDLKLIPDAGQDLYVRMLASELVKHREAHKTERLNPRVKIALVAIAVGLVLAILFICLYIFKKRSTFKDDHEKIEAKDLELPLFDLSLINSATNNFSLNNKLGEGGFGPVYKGKLTNGQDIAVKRLSQSSGQGMNEFKNEVILIAKLQHRNLVKLLGCCIQGDEKMLVYEYMPNKSLDFFIFDRTQRQFLDWSKRYHIICGIARGLMYLHQDSRLRIIHRDLKASNVLLDMDMNPKISDFGLAKTCGGDQTEGRTIRVVGTYGYMAPEYAFDGQFSVKSDAFSYGILLLEIISGKRSRSFCHSTDQNLIAYAWRLWKEGNPEELIDDAIRETCTLSEVLRCINISLLCVQQHPNDRPTMSSVVMMLGCEIPLSQPKQPGFFVQNEVVAMNNGSSNDKSTSANELTITLPDPR 817
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 33054586 33057936 - Lag0018707.1 Lac5g1623 608265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac5g1623 817 SUPERFAMILY Protein kinase-like (PK-like) 486 772 IPR011009 -
Lac5g1623 817 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 577 779 - -
Lac5g1623 817 MobiDBLite consensus disorder prediction 796 811 - -
Lac5g1623 817 Gene3D - 21 151 IPR036426 -
Lac5g1623 817 Gene3D Transferase(Phosphotransferase) domain 1 577 778 - -
Lac5g1623 817 CDD B_lectin 34 154 IPR001480 -
Lac5g1623 817 Pfam S-locus glycoprotein domain 212 320 IPR000858 GO:0048544(InterPro)
Lac5g1623 817 MobiDBLite consensus disorder prediction 796 817 - -
Lac5g1623 817 SMART blect_4 31 154 IPR001480 -
Lac5g1623 817 ProSiteProfiles Bulb-type lectin domain profile. 25 148 IPR001480 -
Lac5g1623 817 ProSiteProfiles PAN/Apple domain profile. 342 423 IPR003609 -
Lac5g1623 817 Gene3D Phosphorylase Kinase; domain 1 474 576 - -
Lac5g1623 817 ProSiteProfiles Protein kinase domain profile. 501 785 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac5g1623 817 Pfam D-mannose binding lectin 73 180 IPR001480 -
Lac5g1623 817 Pfam Protein tyrosine and serine/threonine kinase 502 770 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Lac5g1623 817 SMART ntp_6 343 422 IPR003609 -
Lac5g1623 817 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 185 IPR036426 -
Lac5g1623 817 Gene3D Hepatocyte Growth Factor 339 419 - -
Lac5g1623 817 CDD PAN_AP_plant 340 421 - -
Lac5g1623 817 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 466 576 - -
Lac5g1623 817 CDD STKc_IRAK 507 771 - -
Lac5g1623 817 ProSitePatterns Serine/Threonine protein kinases active-site signature. 622 634 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Lac5g1623 817 Pfam PAN-like domain 342 408 IPR003609 -
Lac5g1623 817 SMART serkin_6 501 771 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac5g1623 817 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 25 785 - -
Lac5g1623 817 PIRSF SRK 1 817 IPR024171 GO:0004674(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac10g0780 Lac-Chr10:6143020 Lac5g1623 Lac-Chr5:33054586 1.60E-205 dispersed
Lac1g3255 Lac-Chr1:52438580 Lac5g1623 Lac-Chr5:33054586 1.80E-95 dispersed
Lac1g3256 Lac-Chr1:52442512 Lac5g1623 Lac-Chr5:33054586 5.20E-98 dispersed
Lac1g3267 Lac-Chr1:52510724 Lac5g1623 Lac-Chr5:33054586 3.30E-169 dispersed
Lac2g1328 Lac-Chr2:11106976 Lac5g1623 Lac-Chr5:33054586 6.00E-258 dispersed
Lac2g1329 Lac-Chr2:11118071 Lac5g1623 Lac-Chr5:33054586 1.00E-256 dispersed
Lac2g1333 Lac-Chr2:11174458 Lac5g1623 Lac-Chr5:33054586 1.30E-157 dispersed
Lac4g2867 Lac-Chr4:47245401 Lac5g1623 Lac-Chr5:33054586 1.20E-128 dispersed
Lac5g1623 Lac-Chr5:33054586 Lac5g1650 Lac-Chr5:33507391 0.00E+00 dispersed
Lac2g2648 Lac-Chr2:40772503 Lac5g1623 Lac-Chr5:33054586 3.50E-76 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
86193 PF07714 PK_Tyr_Ser-Thr 4.10E-49 CL0016 Lac PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac5g1623 - - - 0.0