Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac5g1650 ATGGACTCTTTCTCTCAAACACTAATCGCTTTTAACTTAGCCTTTTGTCTCTTCAGGTCTGTAGCTGCCATTGATTCTTTAACTGCTCGAAACCCATTTCTCAGCGATGGGCTTAACGGCAGCAGTTTGGTCTCCGGAAATGGAAACTTCGAATTGGGTTTCTTCAGTCCTGGTCCTGGCCTTCCCAGTAAGCGTTACTTGGGAATCTGGTTCAAGAATCGGCGCGGTCCGACCTCTGTTTGGGTTGCAAACAGGGAAAACCCCATTAACGACTTGTCAGGTGTATTGGTAATGAACATTGCTACAGGAGACCTTACACTTTATAGCCACAATAACACTGCGATTGTTTGGTCTGCCAGGTTACTGAGAAAAGTCCCCAATGGGGTATTGCAGCTATTGAACACTGGAAATCTTGTGCTGCGAGATGGGGAAGATACAAGTCCCCAGAAATATTCTTGGCAAAGCTTTGATTACCCAACTGACACTCTCTTGCCTGGAATGAAGCTAGGTTGGGACTTGAGAAATAACATCGATAGAAGATTGTCTGCTTGGAAGAATTCCAATGATCCATCTCCTGGAAGCCTCAGTTGGAGGGTGGAGCTTCATGAATATCCTGAGTCTGTTATGTGGAACGGTTCCAAGGAATACTTCAGATTGGGCCCATGGAATGGTGTGGGAATCACTGGTTGGCCAATAGACTTCGTCCCAATGCTGAACGTCATCTTTGTTTCCAATGAGGATGAGGTTTACTACCAATACTCTGAAGTAAATGCGTATTATACAGCGATGCTGGTGTTGAACCAATCCGCTTATGTGCGCTCACTGTACTTGTGGTCTGTAACTGAGGGACAATGGACGGTCTACAATTCACTACCAAATGACTTCTGTGACACTTATGCACTGTGTGGCCCTTATGGATATTGTGATCTTAGAGACAGTCCATCTTGTAAGTGTCTAGAAGGGTTTAAGCCAAGATTACCTGAGAATTGGAAGGCAGGGGAATTTGCAGATGGTTGTGAACGAAACAAACCGATGAATTGTAGCGATGAAATTGGGTTTGCACAATTCAACAAGTTGAAATTGCCAGATACAAAGCATACTTGGGTCAACGAAAGCATGAATCTTGAAGAATGCAAGGAAAAATGCTTGAGGAACTGTTCTTGTATGGCTTATGCAAATAACAATATCATTGGGAGTGGCAGTGGTTGTGCCTTATGGATAGGTGATATCATTGACTTGAAAATAATTCCGGGTGCTGGACAGGATTTACATGTCAGGATGCTAGCATCAGAATTAGTCAAGCATAGAGAGGCACACGAAAGGTTGAATCCTAAGGTGAAGATTGCTATACTTGTGATTGCCACTGGTTTAGTTTTGGCTATCCTCTACATTTGCTTATACATTTTCAAAAAGAGGTCAACCTTCAAAGATGATCACCATGAGAAATTAGAAGCTGAAGACTTGGAGCTTCCTTTGTTTGATCTATCCTTGATAAATAGTGCCACCAATAACTTCTCACTTGATAATAAAATTGGAGAAGGGGGCTTTGGACCAGTATACAAGGGTAAGCTCACAAATGGACAAGATATTGCTGTGAAGAGACTTTCACAGTGTTCTGGACAGGGAATAAATGAGTTCAAGAATGAAGTAATCCTATCTGCAAAGCTTCAACATCGAAATCTCGTAAAGCTTCTTGGTTGTTGCATTCAAGGAGACGAGAAAATGCTAGTTTATGAGTACATGCCGAACAAAAGTTTGGACTTCTTTATATTTGATGAAGCACGACGTCGGCTATTAGATTGGTCTCAACGATATCACATTATCTGTGGAATTGCAAGAGGGCTCGGGTATCTTCATCAAGATTCCAGATTAAGGATTATACATAGAGATCTAAAAGCAAGTAACGTTTTACTTGATATGGATATGAATCCAAAAATCTCTGATTTTGGTCTTGCGAAAACTTGTGGTGGGGATGAAACTGAAGGAGAGACGACAAAAGTGGTTGGAACCTATGGATACATGGCTCCAGAATATGCTTTTGATGGACAATTCTCGATAAAATCAGACACATTTAGTTACGGGATTTTGTTGTTGGAGATCATTAGTGGAAAAAGGAGCCGAGGATTTCGTCATTCAAATGACCAAAATCTCATTGGATATGCATGGCAATTGTGGAAAGATGGAAATCCAGGAGAATTGATTGACGATGCCATTCAAGAAACATGCAATTTCTCTGAGGTACTAAGATGTATCAATATCAGCTTGTTGTGCGTTCAACAACATCCCAACGATCGACCCACGATGTCATTGGTGGTTATGATGTTAGGCTGCAAAATTCCTTTGTTGCAACCGAAACAACCAGGATTTTTTGTAGAAAGTGAAGGCATTACAATGGATAACTGCTCAAGTAAAGATAAATCAGCTTCAACCAGTGGGTTGATGTTTACATTCTCAGATGCTCAAGACTTGAAGCAAAAGGCTTATTATTATATTTTTCCATCCTCACGTTTCCAGCAACATACCCTTCTCTGTTCAGATTCAATGGCTAACACACCAGCTTTATCTTCCCATGCCACCACTTCACCTCTGTTTCTTTTATCAAACATTTGCAATCTTGTGGCACTTCGCTTGGATTCAACAAATTATGTGTTGTGGAAATTCCAAGTTGCTTCCATCTTGAAGGCTCATTCTCTTTTGGGCATATCGACGACTCCCTATCCAAACCCGATCAATATGTACGTCCTATCGGCAACTACAGACACGACAACTACAAACACAGCACCAAGAGAGGTCAGTTCTGATTATATTCAATGGGTCTCTCGTGATCAAGCTCTCATCACTCTTATCAATGCTACGTTATCTCCATCTGCTCTTGCACATGTGGTTAGTTCTACTTCATCTAAAGATTTATGGCTTTCTTTAGAAAAACGATATGCTTCAAATACTAGATCTAGTATTCTTGATTTAAGATCTGCCTTGTATAAAATCAAGAAACTTCCATCTGAATCCATTGAAAAATATACTTGTCGAATTAAAGAAATTGTTGATAAACTTGCTGCTATTTCGGTGTTCATTGAGGATGAAGAAATACTCGTACATACCTTGAATGGGCTACTCGCTGAGTATAATGCTTTTGCACGTCAATCCAAACAAGGAGTGGTTCTTTGTCCTTGGAAGAACTCCATGTTTTGTAACTCACGTGCAGCGATCAGCAATCCTCTTCGGATCTGGTCAAACACCACGCGCGGGTCCATATTCGGGTCACACTCAAATGGTTTCGGGTCTGAGCATAATACCGAGTCTAGAAGCGGTATTCTTGGCCATTATTCATCAAATTATGACTCGGGATTTGGATCTGGACGTATTTTCTGTCAAATATGCTCAAAACCTGGTTATGGAGCTCTTGACTGCTACAATAGGATGAACTTTTCCTATCAGGGTCGCATCCACCGCTCAATTAGATGCTATGGCGATTTGCCAGCAGATGAGCGCACTAATGAAAATTCAATATCTCAGAATGGTCAACCTTCCAATGGCACTGTCAATAATCATCCCATGCAAACACGGGCTAAGTCAAGAATTTTCAAGCCAAAGGCGTTTGTACTTTCAACCGTGACCACTTTAGTTCCAACTCCTACTTCATATTCTGTTGCTTCAAAGTATCCAGCATGGCGATCCGCTATGTGTGAGGAATTCAATGCCATTCAGGAACAAGGTTTTGAATTTACTGAAACCTTTAGTCCAATTGTTAAAAAGCCCACAATCAGAGTTATATTAGCTCTTACTGCCCAGTATCAGTGGTCTTTAACTCAACTGGATGTTAAGAATGCTTTTCTGCGTGGTCACTTAAATGAGGAAGTTTATATGTCTCAACCACTTGGCTTTCTTGACAAGTCCAATTCACATCATGTTTGCCGCCTTCATAAGAGACTTTATGGTCTAAAACAAGCTCTTCGAGCTTGGTTTGACCGCTTTACATCATATTTGTTCACCTTGGGATTTTCTGCTTCTGCTGCTGATTCGTCCTTATTTATATCAGATCTTGGTGCATTGAAATACTTCTTGGCGTGGAAGTCCACACCACCTCTGATGTATCTCACTTTTACTAGACCAGACATTTCCTTTGCTGTGAATCGTGTCAGTCAATTCATGCATCGACCTACAATTGTTCATTTCTCTACTGTCAAACCTGGTGACACTTCTGATCGACGATCCATTTCTGGATTCATTGCTTTCCTTGGCTCCAGTCCCATATCCTGGTCAGCCAAAAAGCAACCTACGGTCTCACGTTCTTCCACCGAAGTAGAATATCGCTCACTTGCGACTACAGCAGCAGATCTTTATTGGCTACGTCAACTTCTTCGTGATCTTCATGTCACCTTATCAGAACCTCCTACATTATTATGCGACAACATTTCAACTATTGCTCTTGCAAATAATCCAGTTTTCCACACTCACACGAAACACATTGAGATTGACTATCATTTCTTTCGTGAAAAGGTTGCTCGTAAAGATATCTCTGTTAAGTTCATATCTTCAAAAGATCAGTTGGCTGACTTATTCACAAAACCATTGTCATCTCCAATATTCTTGACATTTCGGGACAAACTTCTGACTTCACTACAGTCATCAGTTTGA 4638 41.05 MDSFSQTLIAFNLAFCLFRSVAAIDSLTARNPFLSDGLNGSSLVSGNGNFELGFFSPGPGLPSKRYLGIWFKNRRGPTSVWVANRENPINDLSGVLVMNIATGDLTLYSHNNTAIVWSARLLRKVPNGVLQLLNTGNLVLRDGEDTSPQKYSWQSFDYPTDTLLPGMKLGWDLRNNIDRRLSAWKNSNDPSPGSLSWRVELHEYPESVMWNGSKEYFRLGPWNGVGITGWPIDFVPMLNVIFVSNEDEVYYQYSEVNAYYTAMLVLNQSAYVRSLYLWSVTEGQWTVYNSLPNDFCDTYALCGPYGYCDLRDSPSCKCLEGFKPRLPENWKAGEFADGCERNKPMNCSDEIGFAQFNKLKLPDTKHTWVNESMNLEECKEKCLRNCSCMAYANNNIIGSGSGCALWIGDIIDLKIIPGAGQDLHVRMLASELVKHREAHERLNPKVKIAILVIATGLVLAILYICLYIFKKRSTFKDDHHEKLEAEDLELPLFDLSLINSATNNFSLDNKIGEGGFGPVYKGKLTNGQDIAVKRLSQCSGQGINEFKNEVILSAKLQHRNLVKLLGCCIQGDEKMLVYEYMPNKSLDFFIFDEARRRLLDWSQRYHIICGIARGLGYLHQDSRLRIIHRDLKASNVLLDMDMNPKISDFGLAKTCGGDETEGETTKVVGTYGYMAPEYAFDGQFSIKSDTFSYGILLLEIISGKRSRGFRHSNDQNLIGYAWQLWKDGNPGELIDDAIQETCNFSEVLRCINISLLCVQQHPNDRPTMSLVVMMLGCKIPLLQPKQPGFFVESEGITMDNCSSKDKSASTSGLMFTFSDAQDLKQKAYYYIFPSSRFQQHTLLCSDSMANTPALSSHATTSPLFLLSNICNLVALRLDSTNYVLWKFQVASILKAHSLLGISTTPYPNPINMYVLSATTDTTTTNTAPREVSSDYIQWVSRDQALITLINATLSPSALAHVVSSTSSKDLWLSLEKRYASNTRSSILDLRSALYKIKKLPSESIEKYTCRIKEIVDKLAAISVFIEDEEILVHTLNGLLAEYNAFARQSKQGVVLCPWKNSMFCNSRAAISNPLRIWSNTTRGSIFGSHSNGFGSEHNTESRSGILGHYSSNYDSGFGSGRIFCQICSKPGYGALDCYNRMNFSYQGRIHRSIRCYGDLPADERTNENSISQNGQPSNGTVNNHPMQTRAKSRIFKPKAFVLSTVTTLVPTPTSYSVASKYPAWRSAMCEEFNAIQEQGFEFTETFSPIVKKPTIRVILALTAQYQWSLTQLDVKNAFLRGHLNEEVYMSQPLGFLDKSNSHHVCRLHKRLYGLKQALRAWFDRFTSYLFTLGFSASAADSSLFISDLGALKYFLAWKSTPPLMYLTFTRPDISFAVNRVSQFMHRPTIVHFSTVKPGDTSDRRSISGFIAFLGSSPISWSAKKQPTVSRSSTEVEYRSLATTAADLYWLRQLLRDLHVTLSEPPTLLCDNISTIALANNPVFHTHTKHIEIDYHFFREKVARKDISVKFISSKDQLADLFTKPLSSPIFLTFRDKLLTSLQSSV 1545
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 33507391 33515670 + Lag0018734.1 Lac5g1650 608292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac5g1650 1545 CDD STKc_IRAK 511 775 - -
Lac5g1650 1545 Pfam Reverse transcriptase (RNA-dependent DNA polymerase) 1236 1352 IPR013103 -
Lac5g1650 1545 SMART blect_4 34 159 IPR001480 -
Lac5g1650 1545 SMART serkin_6 505 782 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac5g1650 1545 CDD B_lectin 38 159 IPR001480 -
Lac5g1650 1545 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 470 580 - -
Lac5g1650 1545 Pfam S-locus glycoprotein domain 217 325 IPR000858 GO:0048544(InterPro)
Lac5g1650 1545 ProSiteProfiles Bulb-type lectin domain profile. 29 153 IPR001480 -
Lac5g1650 1545 ProSiteProfiles PAN/Apple domain profile. 347 428 IPR003609 -
Lac5g1650 1545 SUPERFAMILY Protein kinase-like (PK-like) 490 775 IPR011009 -
Lac5g1650 1545 SUPERFAMILY DNA/RNA polymerases 1237 1497 IPR043502 -
Lac5g1650 1545 ProSitePatterns Serine/Threonine protein kinases active-site signature. 626 638 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Lac5g1650 1545 Pfam gag-polypeptide of LTR copia-type 938 1047 - -
Lac5g1650 1545 SMART ntp_6 348 427 IPR003609 -
Lac5g1650 1545 CDD PAN_AP_plant 344 426 - -
Lac5g1650 1545 Gene3D Transferase(Phosphotransferase) domain 1 581 779 - -
Lac5g1650 1545 Pfam Protein tyrosine and serine/threonine kinase 506 773 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Lac5g1650 1545 CDD RNase_HI_RT_Ty1 1398 1528 - -
Lac5g1650 1545 Gene3D Phosphorylase Kinase; domain 1 468 580 - -
Lac5g1650 1545 Gene3D - 30 156 IPR036426 -
Lac5g1650 1545 Pfam PAN-like domain 347 413 IPR003609 -
Lac5g1650 1545 Pfam D-mannose binding lectin 78 185 IPR001480 -
Lac5g1650 1545 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 581 783 - -
Lac5g1650 1545 SUPERFAMILY alpha-D-mannose-specific plant lectins 79 190 IPR036426 -
Lac5g1650 1545 ProSiteProfiles Protein kinase domain profile. 505 782 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac5g1650 1545 MobiDBLite consensus disorder prediction 1164 1185 - -
Lac5g1650 1545 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 31 789 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac5g1623 Lac-Chr5:33054586 Lac5g1650 Lac-Chr5:33507391 0.00E+00 dispersed
Lac5g1633 Lac-Chr5:33156031 Lac5g1650 Lac-Chr5:33507391 0.00E+00 dispersed
Lac5g1650 Lac-Chr5:33507391 Lac7g1369 Lac-Chr7:13486058 4.40E-132 dispersed
Lac10g2392 Lac-Chr10:36729452 Lac5g1650 Lac-Chr5:33507391 6.60E-38 wgd
Lac11g1458 Lac-Chr11:24494375 Lac5g1650 Lac-Chr5:33507391 1.00E-18 wgd
Lac2g3064 Lac-Chr2:48582126 Lac5g1650 Lac-Chr5:33507391 7.30E-35 wgd
Lac2g2640 Lac-Chr2:40415204 Lac5g1650 Lac-Chr5:33507391 7.70E-120 wgd
Lac5g1650 Lac-Chr5:33507391 Lac7g2363 Lac-Chr7:40042104 1.20E-42 wgd
Lac5g1650 Lac-Chr5:33507391 Lac7g1411 Lac-Chr7:14076493 5.90E-09 wgd
Lac5g1650 Lac-Chr5:33507391 Lac9g0485 Lac-Chr9:9189421 5.70E-15 wgd
Lac5g1650 Lac-Chr5:33507391 Lac9g0450 Lac-Chr9:8599711 3.70E-65 wgd
Lac5g1650 Lac-Chr5:33507391 Lac9g0947 Lac-Chr9:21522801 3.50E-33 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
86195 PF07714 PK_Tyr_Ser-Thr 3.70E-47 CL0016 Lac PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac5g1650 - - - 0.0