Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac5g1656 ATGGCCACCACCCCTTCCCCTTCCCCTTCCCATTCCCACCACCACACCGCCACCACCTCCGACGAAGAAGAACAAGAACAAGAAGACCAATCCAACGGCGCTGGCTTCTGCCGGAACCTTCACGGAGTCGGCTCGGTTCTCGACCCGAGAACCAAATGGGTCCGCGAATGGAACCGGGTCTTCCTCCTGGTCTGCGCGGCCGGCCTGTTCGTGGACCCTCTCTTCCTCTACACGCTCTCCATAAGCGAGGCCTGGATGTGCGTCTTCGTCGACGGCTGGCTCGCCATCACCGTCACCGTCCTCCGCTGCATGGCCGACGCCTTGCACCTCTGGAACATCTGGCTCCAGCTCAAGACTGCCACCAGATCTTCCTTCGCCGCCGCCGACAACACACGCCTCACAGATACAACCCCTCGCGCCGTCGCTCTCCGCTACTTCAAGTCCAAGAAAGGCTTCTTCTTCGATCTCTTTGTCATTCTTCCTCTTCCTCAGGTTCTATTATGGGTTGTAATTCCTTGGATAATGAAAGAAGGATCAGTGACATTGGTGATGACAGTGTTGTTGATAGTATTTCTGTTTCAATATTTGCCCAAACTCTACCACTCGGTTTGCCTCTTGCGCCGCCTCCAAAACCTCTCTGGCTACATCTTCGGCACTGTTTGGTGGGGCATTGCTCTCAATCTCATTGCCTACTTTGTTGCTGCTCACGCTGCAGGAGCATGCTGGTACCTGCTGGGGATACAAAGGGCAGCCAAGTGCCTGAAAGAGCAATGCAGGGCAACGAGCAGCTGTGGACTGAGATCGTTGTCCTGCAAAGACCCAATATTCTATGGGGCAACGGACATGAACATGGGCAGAGACAGAGCAAGATTTGAATGGGCGAACAACAGGCTACCAAAATTCATGTGTTTGGACACTGCAGACAACTTCGATTATGGAGCTTACAAATGGACTGTTCAGCTTGTTGTCAATCAAAGTCGCTTGGAAAAGATCCTTTTCCCCATCTTTTGGGGCCTTATGACTCTTAGTACATTTGGCAACTTGGAGAGCACCACGGAATGGCTCGAAGTAGTCTTCAATATCATTGTTCTCACCAGTGGACTTCTCTTGGTCACCATGTTGATTGGAAATATCAAGGTGTTTCTGCATGCAACAACGTCAAAGAAACAAGGAATGCAGCTGAAGATGAGGAACCTCGAGTGGTGGATGAGGAAGCGACGCCTGCCACAAGGCTTCCGACAGCGCGTTCGCAACTATGAGCGGCAGCGGTGGGCAGCGATGCGCGGCGTCGACGAGTGCGAGATGATCAGAAACCTTCCGGAAGGGCTCCGGCGAGACATCAAGTACCACCTTTGCTTGGATCTGGTCAGACAGGTTCCTTTGTTTCAACATATGGATGAACTTGTTCTTGAGAACATATGCGACCGTGTCAAGTCCCTCATCTTCACCAAAGGAGAAACTATAACGAGAGAAGGAGACCCAGTGCAGAGGATGCTATTCGTAGTGCGAGGGCACCTCCAAAGCAGCCAAGTCCTACGCGACGGTGTCAAGAGCTGCTGCATGTTGGGCCCAGGCAACTTCAGCGGCGACGAGCTTCTGTCCTGGTGCCTCCGCCGGCCATTCATAGAGCGCCTGCCGCCCTCCTCATGCACTCTCGTCACTCTCGAGACCACCGAGGCCTTCGGCTTGGAGGCCGACGACGTCAAGTACGTAACCCAGCACTTCCGCTACACATTCGTCAACGACAAGGTCAAGCGCAGCGCCCGTTACTACTCCCCCGGCTGGCGCACTTGGGCCGCCGTCGCCATCCAGCTCGCCTGGCGCCGATACCGCCACCGTCTCACCCTCACCTCCTTGTCCTTTATTCGCCCTCGCCGCCCGCTCTCGCGGTGCTCTTCGCTGGGCGAGGATCGCCTCCGCCTCTATACGGCGTTGCTCACTTCTCCAAAGCCCAATCAGGACCACTTTGATTTTTGA 1977 54.78 MATTPSPSPSHSHHHTATTSDEEEQEQEDQSNGAGFCRNLHGVGSVLDPRTKWVREWNRVFLLVCAAGLFVDPLFLYTLSISEAWMCVFVDGWLAITVTVLRCMADALHLWNIWLQLKTATRSSFAAADNTRLTDTTPRAVALRYFKSKKGFFFDLFVILPLPQVLLWVVIPWIMKEGSVTLVMTVLLIVFLFQYLPKLYHSVCLLRRLQNLSGYIFGTVWWGIALNLIAYFVAAHAAGACWYLLGIQRAAKCLKEQCRATSSCGLRSLSCKDPIFYGATDMNMGRDRARFEWANNRLPKFMCLDTADNFDYGAYKWTVQLVVNQSRLEKILFPIFWGLMTLSTFGNLESTTEWLEVVFNIIVLTSGLLLVTMLIGNIKVFLHATTSKKQGMQLKMRNLEWWMRKRRLPQGFRQRVRNYERQRWAAMRGVDECEMIRNLPEGLRRDIKYHLCLDLVRQVPLFQHMDELVLENICDRVKSLIFTKGETITREGDPVQRMLFVVRGHLQSSQVLRDGVKSCCMLGPGNFSGDELLSWCLRRPFIERLPPSSCTLVTLETTEAFGLEADDVKYVTQHFRYTFVNDKVKRSARYYSPGWRTWAAVAIQLAWRRYRHRLTLTSLSFIRPRRPLSRCSSLGEDRLRLYTALLTSPKPNQDHFDF 658
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 33616474 33623764 - Lag0018740.1 Lac5g1656 608298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac5g1656 658 Gene3D Jelly Rolls 459 577 IPR014710 -
Lac5g1656 658 SUPERFAMILY cAMP-binding domain-like 387 575 IPR018490 -
Lac5g1656 658 FunFam Cyclic nucleotide-gated ion channel 1 388 452 - -
Lac5g1656 658 FunFam cyclic nucleotide-gated ion channel 4 459 577 - -
Lac5g1656 658 CDD CAP_ED 461 567 IPR000595 -
Lac5g1656 658 Gene3D Helix hairpin bin 386 452 - -
Lac5g1656 658 MobiDBLite consensus disorder prediction 1 33 - -
Lac5g1656 658 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 34 615 - -
Lac5g1656 658 Pfam Cyclic nucleotide-binding domain 482 571 IPR000595 -
Lac5g1656 658 ProSiteProfiles cAMP/cGMP binding motif profile. 461 540 IPR000595 -
Lac5g1656 658 SUPERFAMILY Voltage-gated potassium channels 49 382 - -
Lac5g1656 658 SMART cnmp_10 461 590 IPR000595 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac5g1656 Lac-Chr5:33616474 Lac8g2728 Lac-Chr8:44715561 9.50E-185 dispersed
Lac5g1656 Lac-Chr5:33616474 Lac9g2595 Lac-Chr9:44480023 2.00E-105 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac5g1656 K05391 - csv:101207531 1193.33