Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac5g1755 ATGTACAGAGGGCAGTACTGTCCTGAATTTCCTGGTTCGTTTTCAGGATCCTCTTCTTCCCACAGTTTGGTCAGTGATTTCCATGTTTTGCTTGCTCTCAAACAAGGGTTTGAATTCTCTGACTCTGCTGCACTAAGCACTTGGACTGCCTCAAACTTCAGCTCGGTTTGTTCATGGATTGGGATTCGGTGCTCTGGCGGACGAGTTGTGTCAGTTGACTTGACAGATTTGGGCCTTGGTGGCTCTGTTTCCCCATTGATTTCAAGTCTTGACCAACTTTCTGAGTTGTCTGTTGCAGGAAATAACTTCACTGGTGGCATTGAAGTAGTGAATTTGAGTTACCTTCGATTCCTTAACATCTCAAACAACCAGTTCAATGGGGCTCTGGACTGGAACTTCTCGAGTCTGCCGAACTTGGAGGTATTCGATGCCTATGACAACAACTTCACTGCTCTGCTCCCCACTGGGATTTTGAACTTAAAGAACCTCAAATACTTGGACCTTGGAGGTAACTTTTTCCAGGGAAAAATCCCTGAAAGCTATGGCAGTTTAGAAGGGTTGCAGTATCTTTCTCTTGGAGGAAATGATTTGGTTGGGAAAATCCCAGGTGAGTTGGGAAATCTCACAAATTTGAGAGAAATTTACTTGGGCCATTACAATGTTTTCGAAGGTGGGATTCCACCCGAGCTCGGGAAGTTGAGCAATTTGGTTATCATGGAGATTTCAAACTGCAGTTTGGACGGTCAAATTCCTCATGAACTGGGGAATTTGAAGTCCTTGACCACCCTATATTTGCATACGAATCTACTCTCAGGTTCGGTCCCGAAGCAGTTAGGCAATTTGACAAACTTGGTCATTCTTGATCTCTCCAACAATGCACTCACAGGTGAAATCCCATCTGAATTTGTTGATCTCAAACAGCTCCAGCTTCTCTACCTCTTCATGAACAAACTGCACGGATCTATTCCAGACTACATAGCAGATTTTCCAAACTTGGAGTCCTTGGCGCTGTGGACAAACAACTTCACCGGCACAATCCCAAAGAATCTTGGGCAAAATGGGAGGCTTCAGCTCCTTGATTTGTCGACGAACAAGCTCACGGGTACAATCCCTCAGGACTTGTGTTCATCGAACCAACTGAAAATACTGATTCTGATGAACAACTTCCTGTTTGGGCCAATCCCTGATGGCTTGGGGACATGTACCAGTCTTACAAAAGTGAGGTTGGGGCAGAACTATCTGAATGGAAGCATTCCCAATGGCTTCATTTACTTGCCTCAGTTAAATCTAGCAGAGTTTCAGGACAATTACCTTTCAGGTACACTTTCAGAGAATTGGGAGAGTTCATCAAAACCCATGAAATTAGGGCAACTTAATCTCTCTAACAATCTTCTCTCTGGAACTTTACCATTTTCACTTTCTAATTTCTCTTCTCTGCAAATCCTTCTCCTCAATAGCAACCAGTTTTCTGGTACAATCCCTCCTTCCATTGGAGAACTCAATCAACTTCTAAAGCTCGATCTTAGCAGAAACTCACTTTCAGGTGAAGTTCCACTAGAAATTGGGAATTGCATCCATCTCACTTACCTTGATTTGAGCAAGAACAACCTCTCTGGCCCAATTCCGCCTGAAATTTCCAATGCACATAATCTCAATTACCTCAACTTGTCCAGAAATCACCTAAATCAATCCTTACCGAAATCAATAGGGGCCATGAGGAGCCTCACCATTGCCGATTTCTCCTTCAATGATTTCTCTGGAAAGCTACCGGAATCAGGACAACTTGCCTTCTTCAATGCTTCATCCTTCGCCGGAAATCCTCAACTCTGCGGTTCCCTGCTCAATAATCCCTGCAACTTCGCAACAACAACAACAAAACAAGGAAAAACTCCGGCGTATTTCAAGCTAATCTTCGCCCTAGGCCTACTGGTTTGCTCTCTAGTGTTCGCCATAGCCGCAATAGTCAAAGCAAAATCATTCAAAAGAAACGGCTCAAGTTCATGGAAAATGACCTCATTCCAAAAGCTCGATTTCACCGTCTACGACGTCCTGGAGTGCGTGAAAGACGGTAACGTGATCGGAAGAGGCGGCGCCGGCATCGTCTACCACGGAAAAATGCCGAACGGTGTCGAAATCGCAGTGAAGAAACTCCTAGGGTTCGGCCCTAACAGTCACGACCATGGATTCCGAGCCGAAATCCAAACCCTAGGCAACATTCGACATCGAAACATCGTCAGATTACTCGCATTCTGCTCCAACAAAGAAACAAATCTCCTCGTGTACGAATACATGAGAAACGGAAGCTTAGGCGAAGCACTCCACGGTAAAAAAGGCTCGTTCCTTGGCTGGAATTTGAGATACAAAATCGCCATTGAAGCCGCCAAAGGTCTCTGCTACCTCCACCATGATTGCTCTCCACTAATCGTCCACCGAGACGTGAAATCAAACAATATCCTCTTGAATTCCAACTTCGAAGCTCACGTCGCCGATTTCGGACTGGCGAAGTTCATGTTCGACGGCGGCGCGTCGGAATGCATGTCGGTTGTCGCCGGATCTTACGGCTACATCGCTCCAGAATATGCATACACACTAAGAGTCGACGAAAAAAGTGATGTATATAGTTTTGGAGTTGTGCTATTAGAGCTTTTGACGGGACGTCGTCCAGTTGGAGATTTCGGAGACGGAGTAGTTGACATAGCACAATGGTGTAAAAGAGCTCTAACAAATGGTGAGAGCGAAAACGACATTATTTGCATAGTTGACAAAAGGGTAGGGATGGTACCCAAAGAAGAAGCAAAACACTTATTCTTCATAGCAATGTTGTGTGTGCAAGAGAACAGCGTGGAAAGACCGACAATGAGAGAAGTGGTTCAAATGTTGGCTGAGTTTCCTCACCAATCTCCCAACTATTATCAATCGTCCTCTTCTTCTTCTCCCTGTCAAAATTTGAAGAAGGGTGAAAAGGAGAGAGAAGATTCGTCAAAGTCCAAACCAGAACTTATGGTTTAA 3009 44.8 MYRGQYCPEFPGSFSGSSSSHSLVSDFHVLLALKQGFEFSDSAALSTWTASNFSSVCSWIGIRCSGGRVVSVDLTDLGLGGSVSPLISSLDQLSELSVAGNNFTGGIEVVNLSYLRFLNISNNQFNGALDWNFSSLPNLEVFDAYDNNFTALLPTGILNLKNLKYLDLGGNFFQGKIPESYGSLEGLQYLSLGGNDLVGKIPGELGNLTNLREIYLGHYNVFEGGIPPELGKLSNLVIMEISNCSLDGQIPHELGNLKSLTTLYLHTNLLSGSVPKQLGNLTNLVILDLSNNALTGEIPSEFVDLKQLQLLYLFMNKLHGSIPDYIADFPNLESLALWTNNFTGTIPKNLGQNGRLQLLDLSTNKLTGTIPQDLCSSNQLKILILMNNFLFGPIPDGLGTCTSLTKVRLGQNYLNGSIPNGFIYLPQLNLAEFQDNYLSGTLSENWESSSKPMKLGQLNLSNNLLSGTLPFSLSNFSSLQILLLNSNQFSGTIPPSIGELNQLLKLDLSRNSLSGEVPLEIGNCIHLTYLDLSKNNLSGPIPPEISNAHNLNYLNLSRNHLNQSLPKSIGAMRSLTIADFSFNDFSGKLPESGQLAFFNASSFAGNPQLCGSLLNNPCNFATTTTKQGKTPAYFKLIFALGLLVCSLVFAIAAIVKAKSFKRNGSSSWKMTSFQKLDFTVYDVLECVKDGNVIGRGGAGIVYHGKMPNGVEIAVKKLLGFGPNSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNLLVYEYMRNGSLGEALHGKKGSFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSNFEAHVADFGLAKFMFDGGASECMSVVAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVVDIAQWCKRALTNGESENDIICIVDKRVGMVPKEEAKHLFFIAMLCVQENSVERPTMREVVQMLAEFPHQSPNYYQSSSSSSPCQNLKKGEKEREDSSKSKPELMV 1002
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 35244923 35251247 - Lag0018839.1 Lac5g1755 608397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac5g1755 1002 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 133 220 - -
Lac5g1755 1002 SUPERFAMILY L domain-like 354 611 - -
Lac5g1755 1002 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 764 977 - -
Lac5g1755 1002 SMART serkin_6 687 960 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac5g1755 1002 Pfam Leucine Rich Repeat 235 257 IPR001611 GO:0005515(InterPro)
Lac5g1755 1002 Pfam Leucine Rich Repeat 550 571 IPR001611 GO:0005515(InterPro)
Lac5g1755 1002 Pfam Leucine Rich Repeat 115 136 IPR001611 GO:0005515(InterPro)
Lac5g1755 1002 Pfam Leucine Rich Repeat 478 500 IPR001611 GO:0005515(InterPro)
Lac5g1755 1002 Pfam Leucine Rich Repeat 187 208 IPR001611 GO:0005515(InterPro)
Lac5g1755 1002 Pfam Leucine Rich Repeat 503 524 IPR001611 GO:0005515(InterPro)
Lac5g1755 1002 Pfam Leucine Rich Repeat 355 376 IPR001611 GO:0005515(InterPro)
Lac5g1755 1002 Pfam Leucine Rich Repeat 526 547 IPR001611 GO:0005515(InterPro)
Lac5g1755 1002 Pfam Leucine Rich Repeat 455 476 IPR001611 GO:0005515(InterPro)
Lac5g1755 1002 Pfam Leucine Rich Repeat 162 184 IPR001611 GO:0005515(InterPro)
Lac5g1755 1002 SMART LRR_typ_2 476 500 IPR003591 -
Lac5g1755 1002 SMART LRR_typ_2 329 353 IPR003591 -
Lac5g1755 1002 SMART LRR_typ_2 257 280 IPR003591 -
Lac5g1755 1002 SMART LRR_typ_2 184 208 IPR003591 -
Lac5g1755 1002 SMART LRR_typ_2 549 572 IPR003591 -
Lac5g1755 1002 SMART LRR_typ_2 354 377 IPR003591 -
Lac5g1755 1002 SMART LRR_typ_2 136 159 IPR003591 -
Lac5g1755 1002 SMART LRR_typ_2 281 305 IPR003591 -
Lac5g1755 1002 Gene3D Ribonuclease Inhibitor 25 130 IPR032675 -
Lac5g1755 1002 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 20 962 IPR050647 -
Lac5g1755 1002 ProSiteProfiles Protein kinase domain profile. 687 963 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac5g1755 1002 Gene3D Ribonuclease Inhibitor 328 621 IPR032675 -
Lac5g1755 1002 SUPERFAMILY RNI-like 71 391 - -
Lac5g1755 1002 SUPERFAMILY Protein kinase-like (PK-like) 671 960 IPR011009 -
Lac5g1755 1002 MobiDBLite consensus disorder prediction 983 1002 - -
Lac5g1755 1002 Pfam Protein tyrosine and serine/threonine kinase 690 960 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Lac5g1755 1002 ProSitePatterns Serine/Threonine protein kinases active-site signature. 808 820 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Lac5g1755 1002 Pfam Leucine rich repeat 259 318 IPR001611 GO:0005515(InterPro)
Lac5g1755 1002 Gene3D Phosphorylase Kinase; domain 1 652 763 - -
Lac5g1755 1002 Gene3D Ribonuclease Inhibitor 223 327 IPR032675 -
Lac5g1755 1002 Gene3D Ribonuclease Inhibitor 131 222 IPR032675 -
Lac5g1755 1002 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 221 326 - -
Lac5g1755 1002 Pfam Leucine rich repeat N-terminal domain 25 65 IPR013210 -
Lac5g1755 1002 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 656 763 - -
Lac5g1755 1002 PRINTS Leucine-rich repeat signature 356 369 - -
Lac5g1755 1002 PRINTS Leucine-rich repeat signature 500 513 - -
Lac5g1755 1002 MobiDBLite consensus disorder prediction 967 982 - -
Lac5g1755 1002 MobiDBLite consensus disorder prediction 967 1002 - -
Lac5g1755 1002 Gene3D Transferase(Phosphotransferase) domain 1 764 983 - -
Lac5g1755 1002 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 333 622 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac2g0135 Lac-Chr2:1047543 Lac5g1755 Lac-Chr5:35244923 1.90E-120 dispersed
Lac5g1755 Lac-Chr5:35244923 Lac5g1860 Lac-Chr5:36849506 2.90E-140 dispersed
Lac5g1755 Lac-Chr5:35244923 Lac1g2730 Lac-Chr1:48509523 4.20E-06 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
86196 PF07714 PK_Tyr_Ser-Thr 2.10E-43 CL0016 Lac PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac5g1755 - - - 0.0