Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac5g1771 ATGGAGCCCAAAACGAATATGCGACCCGATCCAGAAGCATCTTTGGGCGTTTACAAAACCCTAGTTTCCTCACTCGTTATAGTCTCTCTTCATAACACACCTCCCGCAGGCTTCCCTCTTGCTCTCGGAAGAACGCTCGCCCTCACAGCGAAACGTTTTTTCCGCGAAGCGATGGCTCTGGTATTGCATTCTTGGAAGACTAACAAAAATGCTTACAAAGCTTTTATAGCTGCAGAATACAATGGTGTCAAGATTGACCTTGTACCAGATTTTACCATGGGTGTATCCAATAAGTCTCCTGAATATCTTAAAATGAACCCTATTGGGAAGGTTCCAGTGCTGCAAACACCTGATGGTGCTATCTTTGAGAGCAATGCTATAGCTCGCTATGTTGCTCGCTTGAAGGACTGCGGTTTGTTTGGCTCTTCTTCAATTGAATATGGACATGTTGAACAGTGGATTGATTTCTCCACAATGGAAATTGATGCTCATCTTTCAAATTTGCTGAGGCCTAGATTTGGATATGGTGTTTACCATCCTGCGGTAGAAGAGGCTTCAAACGCTGCCCTAAAACGATCTTTGGCAGCTTTGAACTCTTACCTTGCATCAAACACATTCCTTGTTGGACACTCTGTTACTCTGGCTGATATCATTTTGACATGCAATCTCTATTTGGGATTCACTTATATGTTGACTAAAAGCTTTACTTCTGAGTTCCCTCACGTTGAGAGGTACTTCTGGACATTGGTGAATCAACCAAATTTCCAAAAGGTAATTGGTGAGGTGAAGCAGACAGAATCTGTTCCACCAGTGAAAACACCTGAAGAGGCTGCAGCAGCTGCCAAACCAAAGCCTGAGCCCAAGAAACAAGAAGAGAAGCCCAAAGCAGCACCTGCTGAGGAAGAGGAGGCACCAAAGCCCAAGGCCAAAAATCCTCTTGACCTTCTCCCTCCCAGTAAGATGATTTTGGATGAGTGGAAACGTCTCTACTCGAACACAAAAACTAACTTCCGTGAGGTTGCGATCAAAGGATTCTGGGATATGTATGACCCTGAAGGGTACTCGCTCTGGTTCTGTGATTACAAGTACAACGAGGAGAATATGGTTTCGTTCGTGACTTTGAACAAAGTCAGTGGATTCCTCCAGAGAATGGATCTTGCTCGCAAGTATGCGTTTGGAAAGATGCTGGTGATCGGATCAGAGGCACCGTACAAGGTGAAGGGGCTATGGCTTTTCCGTGGACAAGAAATCCCACAATTTGTGCTGGACGAGTGCTACGACATGGAGCTGTACGAGTGGAAGAAGGTGGATATCTCTGATGAAGCCCAGAAGGAGAGAGTGAACCAAATGATCGAAGACCAGGAGCCATTCGAGGGAGAAGCTCTTTTGGATGCGAAATGCTTCAAAACTTCATCATCTGTTTCAATGGAAGTTGGCTGCTGTATTACGATCTCAGGGGATGAACGATTAGTTAATCTCAATTTCGCAATGTCCCTTTCTGATGATTCCACTCCCAAAGATAGTATTAAGTCTGGAAATCACCATTCCTCCAGCAGCAACACTGGCTCGATGGTTGCCATCATCCTCCTTGGGATTTTGGTAGTTGTGTTATTATCATTTTTCCTTTTCAAGTTATGGCAAAAGAAGAGAAGAGAGGAACAATATGCCCGACTTCTGAAATTGTTTGAAGAAGATGATGAGCTCGAGGTTGAACTTGGTCTTCGGGATTGA 1731 44.54 MEPKTNMRPDPEASLGVYKTLVSSLVIVSLHNTPPAGFPLALGRTLALTAKRFFREAMALVLHSWKTNKNAYKAFIAAEYNGVKIDLVPDFTMGVSNKSPEYLKMNPIGKVPVLQTPDGAIFESNAIARYVARLKDCGLFGSSSIEYGHVEQWIDFSTMEIDAHLSNLLRPRFGYGVYHPAVEEASNAALKRSLAALNSYLASNTFLVGHSVTLADIILTCNLYLGFTYMLTKSFTSEFPHVERYFWTLVNQPNFQKVIGEVKQTESVPPVKTPEEAAAAAKPKPEPKKQEEKPKAAPAEEEEAPKPKAKNPLDLLPPSKMILDEWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWFCDYKYNEENMVSFVTLNKVSGFLQRMDLARKYAFGKMLVIGSEAPYKVKGLWLFRGQEIPQFVLDECYDMELYEWKKVDISDEAQKERVNQMIEDQEPFEGEALLDAKCFKTSSSVSMEVGCCITISGDERLVNLNFAMSLSDDSTPKDSIKSGNHHSSSSNTGSMVAIILLGILVVVLLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD 576
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 35445598 35451161 - Lag0018855.1 Lac5g1771 608413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac5g1771 576 CDD GST_N_EF1Bgamma 60 134 - -
Lac5g1771 576 SMART EF1G_2 308 416 IPR001662 GO:0003746(InterPro)|GO:0006414(InterPro)
Lac5g1771 576 Gene3D Glutaredoxin 57 131 - -
Lac5g1771 576 SUPERFAMILY eEF1-gamma domain 310 469 IPR036433 GO:0003746(InterPro)|GO:0006414(InterPro)
Lac5g1771 576 Pfam Elongation factor 1 gamma, conserved domain 308 416 IPR001662 GO:0003746(InterPro)|GO:0006414(InterPro)
Lac5g1771 576 Gene3D - 137 270 - -
Lac5g1771 576 FunFam Elongation factor 1-gamma 1 309 469 - -
Lac5g1771 576 Pfam Glutathione S-transferase, C-terminal domain 182 253 IPR004046 -
Lac5g1771 576 SFLD Glutathione Transferase (cytosolic) 61 246 IPR040079 -
Lac5g1771 576 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 143 271 IPR010987 -
Lac5g1771 576 CDD GST_C_EF1Bgamma_like 146 266 - -
Lac5g1771 576 FunFam Elongation factor 1 gamma 136 272 - -
Lac5g1771 576 MobiDBLite consensus disorder prediction 266 315 - -
Lac5g1771 576 FunFam Elongation factor 1B gamma 58 131 - -
Lac5g1771 576 MobiDBLite consensus disorder prediction 279 309 - -
Lac5g1771 576 ProSiteProfiles Elongation factor 1 (EF-1) gamma C-terminal domain profile. 309 469 IPR001662 GO:0003746(InterPro)|GO:0006414(InterPro)
Lac5g1771 576 SFLD Main (cytGST) 61 246 - -
Lac5g1771 576 SUPERFAMILY Thioredoxin-like 55 134 IPR036249 -
Lac5g1771 576 SUPERFAMILY GST C-terminal domain-like 130 269 IPR036282 -
Lac5g1771 576 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 58 139 IPR004045 -
Lac5g1771 576 Gene3D Translation elongation factor EF1B, gamma chain, conserved domain 309 469 IPR036433 GO:0003746(InterPro)|GO:0006414(InterPro)
Lac5g1771 576 PANTHER ELONGATION FACTOR 1-GAMMA 1-RELATED 58 469 IPR044628 GO:0004364(InterPro)
Lac5g1771 576 Pfam Glutathione S-transferase, N-terminal domain 60 133 IPR004045 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac13g2116 Lac-Chr13:31205047 Lac5g1771 Lac-Chr5:35445598 1.00E-180 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac5g1771 K03233 - csv:101215571 688.723