Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac5g1814 ATGCCCACTAACAAGGAGAAAGAGCCTGTTTCTGTGACCGGAGCCAATGGATTCATCGGATCCTGGGTCGTCCGTACGCTGTTGGAGTCCGGCTACACCACCATTCATGCCTCCATCTTCCCAGGCTCCGATCCTTCCCATTTGTTCAATCTCCAGGCCTCCGCTAATCCTAATGCCAGCCTTAGAGTTTTCGAAGCCGACGTAATGGACGGCGAGGCTGTGGCCAGGGCTGTGGAAGGCTGCAAGGGCGTATTCCACATTGCGTCGCCCTGTACGCTGGAGGATCCGATTGATCCGCAGAGAGAATTGGTGGAGCCGGCGGTGCAAGGCACTGTCAATGTTCTTGATGCCGCGAAGAAATTCGGGGTGAGGCGTGTTGTTCTTACTTCTTCCATTTCGGCTCTTGTTCCCAACCCTGGCTGGCCCGCCGATAAGCCCTTCGATGAATCCTCATGGACGGACCTTGAGTACTGCAAATCGCGCAAGAAATGGTATCCAGTGTCAAAAACATTGGCTGAGAAAGCAGCATGGGAGTTTGTGGAGAAGCATGGAATGGATGTAGTTTCCATCCTGCCTGCCACATGTCTTGGTCCTCTTCTGCAGCCTAACTTGAATGCAAGTTGTGCTGTATTGCAGCAGTTGCTCCAGGGATCCAAGGATAGTCAGGAATATCACTGGTTGGGTGCTGTGCATGTCAAAGATATTGCAAAAGCACAAGTTTTATTGTTTGAGTCGCCCACTGCTTCTGGTAGATATCTTTGCACCAACGGTATCTATCAATTTGCTGATTTTGCAGACAAAGTCTCGAAAATCTACCCTGAATTTCCAGTTCACAGATTTGTTGGAGAAACACAACCCGGCTTGGTTGCCTGCAAAGATGCAGCCAAGAGGTTAATTGATTTGGGACTTATTTTCACTCCTCTTGAAGTTGCCATTCGAGATACGGTTGAGAGCCTTAGAAGCAAAGCCTTTTTGGAGCAGTGA 984 49.8 MPTNKEKEPVSVTGANGFIGSWVVRTLLESGYTTIHASIFPGSDPSHLFNLQASANPNASLRVFEADVMDGEAVARAVEGCKGVFHIASPCTLEDPIDPQRELVEPAVQGTVNVLDAAKKFGVRRVVLTSSISALVPNPGWPADKPFDESSWTDLEYCKSRKKWYPVSKTLAEKAAWEFVEKHGMDVVSILPATCLGPLLQPNLNASCAVLQQLLQGSKDSQEYHWLGAVHVKDIAKAQVLLFESPTASGRYLCTNGIYQFADFADKVSKIYPEFPVHRFVGETQPGLVACKDAAKRLIDLGLIFTPLEVAIRDTVESLRSKAFLEQ 327
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 36117689 36120154 + Lag0018898.1 Lac5g1814 608456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac5g1814 327 CDD FR_SDR_e 10 303 - -
Lac5g1814 327 FunFam Cinnamoyl-CoA reductase 1 3 327 - -
Lac5g1814 327 Pfam NAD dependent epimerase/dehydratase family 11 248 IPR001509 -
Lac5g1814 327 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 10 318 IPR050425 GO:0016616(PANTHER)
Lac5g1814 327 Gene3D - 2 327 - -
Lac5g1814 327 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 8 320 IPR036291 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac5g1814 Lac-Chr5:36117689 Lac7g2870 Lac-Chr7:47838316 2.50E-85 dispersed
Lac5g1814 Lac-Chr5:36117689 Lac4g2745 Lac-Chr4:46323593 2.20E-65 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac5g1814 - - - 0.0