Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac5g1819 ATGGTTCTTGTTGGTTCTTTGCAACTATCCTGTCGTCTTGGACCCTGGAGGAACCATTTGCATGAAGAAAATCTTAAGTTTACCTCTCAGAGCAATAACATACGGTTACTGAGTGCAGCCAGTCCACCGTTTCTTTCACAGAAGAACACTTGGAGCACTCATTTATTTACTATGAAATACCCACCTAATTACATTGTGCCTTCTAGATACAATGTTTTTAGGTGCCATTCGTCATTGATGACAGACCAACCACTGGATCCTCCTGGAATGAAGGCTGCTATAGTGGCATTGACAAGGTTTTGTAATGTATTAGGTGGTTGTCCTCCTCCAGTAGTTAAGTTGGTTCCTGCAGTTTGTATTATCATGTTTGCTGTATGGGGTCTTGGGCCATTTTTGCGTTATACTAGAAGCCTACTCCATAGTGATAATAACTGGAAAAAAAGTCGGACATATAAAGTCATGACCTTGTATCTTCAACCATTATTGCTATGGACTGGAGCAACACTTATTTGCAGAGCTTTGGATCGAGTAGTTTTACCTACAGGGTCTAGCCAAGTTGTGAAGCAACGGATATTGAATTTTGTTAGGTCGTTGTCCACTGTGCTGGCCTTCGCTTATTGCTTATCAAGTATGATTCAACAAGCACAGAAGTTCTTCTCAGAGACTAGCGAATCCAGTGATGCAAGAAATATGGGCTTTCAATTTGCTTGGAAAGCTGTATACTCTGCAGTATGGGTTGCTGCTATCTCATTGTTCATGGAGCTGTTGGGCTTTTCTACCCAAAAATGGCTTACGGCTGGAGGTCTTGGGACTGTATTGTTGACATTAGCTGGCCGTGAGATCTTCACCAACTTCCTTTCAAGTGTGATGATTCATGCAACTCGTCCTTTTGTTATTAATGAGTGGATCCAAACAAAGATTGAGGGCTACGAAGTTTCTGGCACTGTTGAGCATGTAGGATGGTGGTCGCCAACGATTATTAGAGGTGAAGATCGTGAAGCAGTTCACATACCAAACCACAAGTTTACTATGAATGTCGTTAGAAATCTCAGTCAAAAAACTCACTGGCGGATTAAAACCCACCTAGCTATCAGCCATTTGGACGTCAATAAAATCAATAATATCGTTGCAGACATGCGGAAAGTCTTAGCCAAGAACCCTCAAGTTGAACAGCAGAAATTGCATAGAAGAGTATTTTTGGACAACGTGGATCCTGAAAATCAGGCACTTTTGATATTGATATCATGTTTTGTCAAGACTTCACATTTTGAAGAATACCTTTGTGTTAAGGAAGCTATAATTTTGGATCTTCTTAGAGTCATTAGACATCACCGGGCTCGACTTGCTACACCAATCCGCACAGTGCAGAAGATGCATAGTGATTCAGACTTGGAAAGCGTTCCATTTGCTGATTCAATATTTGGTCGTGGTGGTGTGACTTTCAATCGTCGAATGCTGATGATTGAACCCCCCAACAAAGTTGATGGAGAAGATAAAAAGCAAAGCCATAGTAGGACATCACGGACAACTGGAGAACAAAATGTTAATCCCATTGCACGGTCGTCGAGCGACAGCAAGGCAGCTAAAGAGACCTCACCATCTGATAGAAAGACAGAAGGCAAGATTGGAGAAGTAAGAGACCCAGATACAAAAAAGCATCCCAAAGTTTCAATGTCAACCTCTGAAGATAAATCTAGCAATGAATTGAAACGCAAATCATCAGCAAAGCCTGATATGCCTTCTTCTGATGCCAAAACAACCAAATCAGATGCTGATAATTCATTTGAGGATTCCAATACCAAGCAATCCGAAAATAGCCCAGGAATTAACAAGCAGAACTACAAGTCTAGCCATCCTGTTGTTTCCATTCCGGAAGATGTTAAGAAACCAGGAGGAACTTCAGCAGCTTCACAGCTAAGGATAGAAGGTGAACAGACACCAGTTTCAAGTCCATCAACAATGAAGCCTGGCGTAGAAGAGAATATAATCCTCGGTGTTGCTTTGGATGGCTCTAAGAGAACACTTCCCATTGAGGAGGACATGCCTTCTTCACCTCAAACCACATCGGGAGCGAAAGATTTGGCAGCACGCTGGAATGGGAACGGGGCGAATGGGGCAACAAACTCCGATAAGGATACGAAACGTCAGACTCCGTGA 2157 42.37 MVLVGSLQLSCRLGPWRNHLHEENLKFTSQSNNIRLLSAASPPFLSQKNTWSTHLFTMKYPPNYIVPSRYNVFRCHSSLMTDQPLDPPGMKAAIVALTRFCNVLGGCPPPVVKLVPAVCIIMFAVWGLGPFLRYTRSLLHSDNNWKKSRTYKVMTLYLQPLLLWTGATLICRALDRVVLPTGSSQVVKQRILNFVRSLSTVLAFAYCLSSMIQQAQKFFSETSESSDARNMGFQFAWKAVYSAVWVAAISLFMELLGFSTQKWLTAGGLGTVLLTLAGREIFTNFLSSVMIHATRPFVINEWIQTKIEGYEVSGTVEHVGWWSPTIIRGEDREAVHIPNHKFTMNVVRNLSQKTHWRIKTHLAISHLDVNKINNIVADMRKVLAKNPQVEQQKLHRRVFLDNVDPENQALLILISCFVKTSHFEEYLCVKEAIILDLLRVIRHHRARLATPIRTVQKMHSDSDLESVPFADSIFGRGGVTFNRRMLMIEPPNKVDGEDKKQSHSRTSRTTGEQNVNPIARSSSDSKAAKETSPSDRKTEGKIGEVRDPDTKKHPKVSMSTSEDKSSNELKRKSSAKPDMPSSDAKTTKSDADNSFEDSNTKQSENSPGINKQNYKSSHPVVSIPEDVKKPGGTSAASQLRIEGEQTPVSSPSTMKPGVEENIILGVALDGSKRTLPIEEDMPSSPQTTSGAKDLAARWNGNGANGATNSDKDTKRQTP 718
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 36181718 36192960 - Lag0018903.1 Lac5g1819 608461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac5g1819 718 MobiDBLite consensus disorder prediction 598 619 - -
Lac5g1819 718 MobiDBLite consensus disorder prediction 490 506 - -
Lac5g1819 718 Gene3D - 297 352 IPR023408 -
Lac5g1819 718 Pfam Mechanosensitive ion channel, beta-domain 281 351 IPR006685 GO:0016020(InterPro)|GO:0055085(InterPro)
Lac5g1819 718 SUPERFAMILY Sm-like ribonucleoproteins 281 351 IPR010920 -
Lac5g1819 718 MobiDBLite consensus disorder prediction 638 656 - -
Lac5g1819 718 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 1 698 IPR045042 -
Lac5g1819 718 MobiDBLite consensus disorder prediction 490 658 - -
Lac5g1819 718 MobiDBLite consensus disorder prediction 507 528 - -
Lac5g1819 718 Gene3D - 195 295 - -
Lac5g1819 718 MobiDBLite consensus disorder prediction 674 718 - -
Lac5g1819 718 MobiDBLite consensus disorder prediction 680 694 - -
Lac5g1819 718 MobiDBLite consensus disorder prediction 701 718 - -
Lac5g1819 718 MobiDBLite consensus disorder prediction 529 597 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac5g1819 Lac-Chr5:36181718 Lac6g1003 Lac-Chr6:9176436 3.20E-194 dispersed
Lac5g1819 Lac-Chr5:36181718 Lac1g0891 Lac-Chr1:23329130 3.50E-55 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac5g1819 K22047 - csv:101217250 1155.58