Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lac5g2063 | ATGAGTTCAATGTTTGATGAGACTGCTCCGGGGCCGGACACCGCCCTATCTTCACCGGCCGCTCCATCGCCGGATGAGTCGTCGTCGTCGTCGTCGTCATCGTCATCGTCTTCACAGCAGTCTCCCAATGGCGATGGCGATTACTCTCCACCACCATCGCCAACAAATGAGGATGACTCCAATTCCTCACGATCTCCATCAGAAGAAGCTCCAGCACCAAGGTCGCGGTCGAGAGGGTCTTCCGATGATAACAAATCCCGTTCATCTCCAAAAGCGAGCAGTCCACGTTCATCGTCGGACGATTCTGATTCTCCTCCATCTCGATCTTCATCACCTGCAGATGCATTGCCTCCACCAGATTCGACCGAAGGAAAGACATCACCGAGATCGTCGGGTGGCGCAAAACTTCATGGATCGTCATCGGAGTCCGATTCACCGTCGTCGGATGTCAATGCAGGAGTTATAATTGGGGTGGCATTGGGGGTGGGAGTACTCATAATTGCTCTCATATCATTAATTGCATTGTGTACGAGGAAGAAGAAGAGGAAGGGAGATCCTATGCAATATTATGGAGATCATGGTGGTGACTATTACAACAGTTCACAACAACAAAACTGGCACAACGGCATGCACGGCCCCGGTCCCGGTCCCGGTCCGGGGACGGACCAATTCGGGAGGCCACCGGTATCGGGGTCGCCGCCAGGGAGCGGGTGGCCGATGAATAGCGAGAACATGACGACGAGCAGCAGCTACACGGGTGGCCCTCCTCTTCCTCCGCCATCACCGTCGATAGCCTTTGGGTTCAACAAGAGCACATTCACGTACGATGAGCTCGCAGCGGCAACGGGCGGGTTTGCGCACGGGAACCTGCTCGGGCAGGGCGGGTTCGGGTACGTGCACAAGGGGGTGCTGCCGAACGGGAAGGAGGTGGCGGTGAAGAGCCTGAAGTCGGGCAGTGGGCAAGGGGAGAGGGAGTTCATGGCTGAGGTTGAGATTATTAGTAGAGTCCACCACCGGCATTTGGTGTCCTTGGTTGGCTTTTGCATTGCCGGTGGACAAAGAATGTTGGTCTATGAGTTTGTCCCTAACAACACCTTGGAGCATCACCTTCATGGTAAAGGTCTCCCAGTAATGAATTGGCCATCTAGACTTCGTATTGCTATCGGTTCTGCCAAGGGTCTCGCTTACCTTCACGAAGATTGTCATCCAAAGATTATTCATCGAGATATCAAGTCGGCTAATATTCTGATTGATGCCAACTTTGAAGCAATGGTGGCAGATTTTGGATTGGCTAAACTATCTTCAGATAATCATACTCACGTCTCCACTAGGGTTATGGGTACATTTGGGTATCTGGCACCAGAATATGCATCAAGTGGGAAGTTGACAGAGAAGTCCGATGTGTTCTCATTTGGTGTAATGTTATTGGAACTCATCACTGGAAAACGACCCGTTGATCCCACTCACACCATGGAGGATAGCTTAGTCGACTGGGCTCGACCACTTATGAGTCGGGCATTGATGGAAGGCATCTACGAAGAGTTGGTGGATATACGGTTAGATAACGAGTTCAACACTCAGGAGATGGCTCGTATGGTAGCTTGTGCTGCTGCCTCCATCCGTCACTCGGCTAGAAAACGCCCCAAAATGAGTCAGGTAGTACGAGCTTTAGAAGGAGATGTATCATTGGATGATCTGAACGAAGGGATAAGACCAGGACAAAGCTCCATTTACAGTGGGACGAGCTCAGAGTACGACACGAGTGCGTACCATGCCGACATGTCGAAATTCAGGAAGTTAGCTTTGTCGGACGACAGCAGCGAGCTCGGAACTTCTAGCAATGACTCGAGAGAGATGAACCATCCTGGAGCCCAAAGACCACTCTTTTGA | 1890 | 51.69 | MSSMFDETAPGPDTALSSPAAPSPDESSSSSSSSSSSSQQSPNGDGDYSPPPSPTNEDDSNSSRSPSEEAPAPRSRSRGSSDDNKSRSSPKASSPRSSSDDSDSPPSRSSSPADALPPPDSTEGKTSPRSSGGAKLHGSSSESDSPSSDVNAGVIIGVALGVGVLIIALISLIALCTRKKKRKGDPMQYYGDHGGDYYNSSQQQNWHNGMHGPGPGPGPGTDQFGRPPVSGSPPGSGWPMNSENMTTSSSYTGGPPLPPPSPSIAFGFNKSTFTYDELAAATGGFAHGNLLGQGGFGYVHKGVLPNGKEVAVKSLKSGSGQGEREFMAEVEIISRVHHRHLVSLVGFCIAGGQRMLVYEFVPNNTLEHHLHGKGLPVMNWPSRLRIAIGSAKGLAYLHEDCHPKIIHRDIKSANILIDANFEAMVADFGLAKLSSDNHTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGKRPVDPTHTMEDSLVDWARPLMSRALMEGIYEELVDIRLDNEFNTQEMARMVACAAASIRHSARKRPKMSQVVRALEGDVSLDDLNEGIRPGQSSIYSGTSSEYDTSAYHADMSKFRKLALSDDSSELGTSSNDSREMNHPGAQRPLF | 629 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 39108611 | 39116048 | + | Lag0019147.1 | Lac5g2063 | 608705 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lac5g2063 | 629 | PANTHER | PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 | 112 | 599 | IPR047117 | - | |
Lac5g2063 | 629 | MobiDBLite | consensus disorder prediction | 603 | 629 | - | - | |
Lac5g2063 | 629 | SUPERFAMILY | Protein kinase-like (PK-like) | 259 | 557 | IPR011009 | - | |
Lac5g2063 | 629 | Pfam | Protein tyrosine and serine/threonine kinase | 289 | 555 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Lac5g2063 | 629 | MobiDBLite | consensus disorder prediction | 53 | 70 | - | - | |
Lac5g2063 | 629 | FunFam | Proline-rich receptor-like protein kinase PERK1 | 361 | 568 | - | - | |
Lac5g2063 | 629 | MobiDBLite | consensus disorder prediction | 605 | 620 | - | - | |
Lac5g2063 | 629 | SMART | serkin_6 | 285 | 546 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Lac5g2063 | 629 | MobiDBLite | consensus disorder prediction | 194 | 258 | - | - | |
Lac5g2063 | 629 | FunFam | proline-rich receptor-like protein kinase PERK1 | 263 | 360 | - | - | |
Lac5g2063 | 629 | ProSiteProfiles | Protein kinase domain profile. | 285 | 563 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Lac5g2063 | 629 | Gene3D | Transferase(Phosphotransferase) domain 1 | 361 | 568 | - | - | |
Lac5g2063 | 629 | MobiDBLite | consensus disorder prediction | 1 | 148 | - | - | |
Lac5g2063 | 629 | MobiDBLite | consensus disorder prediction | 235 | 252 | - | - | |
Lac5g2063 | 629 | Gene3D | Phosphorylase Kinase; domain 1 | 261 | 360 | - | - | |
Lac5g2063 | 629 | MobiDBLite | consensus disorder prediction | 86 | 116 | - | - | |
Lac5g2063 | 629 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 405 | 417 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Lac5g2063 | 629 | ProSitePatterns | Protein kinases ATP-binding region signature. | 291 | 313 | IPR017441 | GO:0005524(InterPro) | |
Lac5g2063 | 629 | MobiDBLite | consensus disorder prediction | 123 | 148 | - | - | |
Lac5g2063 | 629 | MobiDBLite | consensus disorder prediction | 20 | 46 | - | - | |
Lac5g2063 | 629 | CDD | STKc_IRAK | 291 | 559 | - | - | |
Lac5g2063 | 629 | MobiDBLite | consensus disorder prediction | 195 | 209 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lac5g2063 | Lac-Chr5:39108611 | Lac9g1665 | Lac-Chr9:36012322 | 1.50E-163 | dispersed | |
Lac1g2984 | Lac-Chr1:50566475 | Lac5g2063 | Lac-Chr5:39108611 | 1.20E-41 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
86205 | PF07714 | PK_Tyr_Ser-Thr | 7.80E-47 | CL0016 | Lac | PK |
Pathway information
