Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac5g2065 ATGTTTCATCCAGTCCTCATACTCTGTTTTCTCCCCTCTGTTTTAGCGTTATTCCTCTTCCTGATTCTGCTCAGAAGGAAGAGAAATGCCGTCGATCTGCCGCCTGGAAACATGGGCTGGCCGTTTCTCGGCGAGACCGTCGGCTATCTCCGGCCCTACTCCGCCACCACCATCGGAGATTTCATGGAGAATCATATCAAGAGATATGGCAAAGTGTACAAGTCGAACCTGTTCGGAGAGCCAACGGTGGTGTCGGCCGACGCCGGACTCAACCGGTACATACTCCAGAACGAAGGACGGCTGTTTGAATGTAGCTACCCGAAGAGCATCGGCGGGATCCTCGGGAAATGGTCGATGCTGGTTACCGTCGGCGACATGCACCGGGATATGAGAATGATATCTCTGAACTTTTTGAGCCAGAGTAGGCTCAAGACTCATCTCTTGAAGGAGGTTGAGAACCAGACTCTGCTCGTCCTCCGTTCTTGGAAAGATTCCTCCACGTTTTTGGCGCAGGACGAGGCCAAAAAGTTCACTTTCAATTTAATGGCGAAACACATCATGAGTTTGGATCCGTGGAAGTTGGAGACGGAGATGTTGAAGAAGGAGTATGTGACTTTCATGAAAGGAGTGATTTCTCCGCCGCTGAATCTGCCAGGAACGCCGTACAGAAGAGCTTTGAAGTCTCGGTCGACGATCTTGAAGTTCATCGAACAGAAAATGGAGGAACGGAAGTTGAAAATCGAAGCCGACGGCGGAGATTTCCAGGATGATGATCTACTCGGCTGGGCATTGAAGCACTCAAATCTCTCGACAGAGCAAATCCTCGACCTGATTCTAAGCTTGCTGTTCGCCGGCCACGAGACGTCGTCCGTCGCCATAGCTCTGGCCATCTTCTTCCTCTCCAGCAGCCCGGCCGCCGTCCAACAGTTGAGGGAAGAACACCTGGAGATCGCCAGAGCCAACAAACGATTGGGAAAGACGGAATTGGATTGGGAAGATAACAAGAAAATGGAATTCACGCAATGTGTGATTAACGAGACGCTTCGGCTTGGAAACGTGGTCAGATTTCTTCACAGAAAGGCACTGAAGGATGTACGGTACAGAGGTTACTTCATTCCACGTGGATGGAAAGTGCTTCCTGTGATTTCTGCTGCGCATTTGGATTCTTTAGTTTTTGACCAACCTCACAACTTTAATCCATGGAGGTGGCAGGTTAGTGCTCTGCTCTAG 1230 50.24 MFHPVLILCFLPSVLALFLFLILLRRKRNAVDLPPGNMGWPFLGETVGYLRPYSATTIGDFMENHIKRYGKVYKSNLFGEPTVVSADAGLNRYILQNEGRLFECSYPKSIGGILGKWSMLVTVGDMHRDMRMISLNFLSQSRLKTHLLKEVENQTLLVLRSWKDSSTFLAQDEAKKFTFNLMAKHIMSLDPWKLETEMLKKEYVTFMKGVISPPLNLPGTPYRRALKSRSTILKFIEQKMEERKLKIEADGGDFQDDDLLGWALKHSNLSTEQILDLILSLLFAGHETSSVAIALAIFFLSSSPAAVQQLREEHLEIARANKRLGKTELDWEDNKKMEFTQCVINETLRLGNVVRFLHRKALKDVRYRGYFIPRGWKVLPVISAAHLDSLVFDQPHNFNPWRWQVSALL 409
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 39155217 39157020 - Lag0019149.1 Lac5g2065 608707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac5g2065 409 SUPERFAMILY Cytochrome P450 29 403 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac5g2065 409 PRINTS E-class P450 group I signature 341 359 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac5g2065 409 PRINTS E-class P450 group I signature 381 405 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac5g2065 409 PRINTS E-class P450 group I signature 273 290 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac5g2065 409 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac5g2065 409 PRINTS E-class P450 group I signature 293 319 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac5g2065 409 PANTHER CYTOCHROME P450 26 32 403 - GO:0004497(PANTHER)|GO:0016125(PANTHER)|GO:0016491(PANTHER)
Lac5g2065 409 CDD CYP90-like 65 404 - -
Lac5g2065 409 Gene3D Cytochrome P450 24 407 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac5g2065 409 Pfam Cytochrome P450 34 404 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac2g0420 Lac-Chr2:3072198 Lac5g2065 Lac-Chr5:39155217 3.40E-10 dispersed
Lac4g2977 Lac-Chr4:48035012 Lac5g2065 Lac-Chr5:39155217 1.70E-71 dispersed
Lac5g2065 Lac-Chr5:39155217 Lac8g2547 Lac-Chr8:43205763 1.80E-85 dispersed
Lac11g1121 Lac-Chr11:13888203 Lac5g2065 Lac-Chr5:39155217 1.30E-44 transposed
Lac12g0854 Lac-Chr12:8873183 Lac5g2065 Lac-Chr5:39155217 2.80E-48 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac5g2065 K09587 - csv:101211854 738.799