Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lac5g2068 ATGGAAGCCAATTTCGAGGAGCTGAGGCAAAGCTTCAGAAGTGGAAGAACAAGGAGTTTGGAGTGGAGAAAAAACCAGCTGATTTCCTTGATTCAGTTCATCCACGACAAAGAAAACGCCATTTTTGAAGCTCTGTACCAAGATCTTGGGAAGCATCCTGTGGAAATTTTTCGAGATGAGGTTGGAGTTGTTCTGAAATCTGCAAATAATGCTCTGTGCTGTTTAAAGAAATGGATGGCCCCTCAAAAGAAATATGTGCCATTACTATTCTTCCCAGCAAAAGGAGAAGTTTTGTCAGAGCCATTTGGCCTTGTCCTCATAATTTCATCTTGGAACTTTCCACTTTCTTTGGCATTGGATCCATTAATTGGAGCGATATCGGCGGGCAACACGGCGGTCCTAAAACCGTCGGAATACGCTCCGGCTTGCTCTTCTTTTCTTGCTGCAACACTCCCTCTTTACCTTGACAATAAAGCCATCAAGGTTGTGGAGGGTGGAGCTGATGTTAGTGAACAACTTCTACAGCATAAGTGGGATAAGATCTTCTTCACTGGGAGTCCAAAGGTTGCAAGAATTGTGATGTCTGCAGCTGCAAAGCATTTAACTCCTGTTACTTTAGAGCTTGGGGGAAAATGCCCTGCAATCTTTGATTACTCCTCTGTTCATACCAATATGAAGGTAGCAGTCAAGAGAATCGTCGGAGGAAAGTGGGGGCCGTGCTCCGGGCAGGCGTGCATAGGGATAGATTATGTTCTTGTGGAGGACAAGTTTGCTTCAGAATTGATCGAGTCGATAAAGCGAATACTCAAGAAGTTTTACGGAGAAAACTCGAAAAACTCGGCGAGTCTGGCTCGAATTGTTAATGAGCAACATGTTGAAAGAATCAGCAATCTTCTCAATGACCCCAAGGTTGCTGCTTCCATTGTCCATGGTGGTTCCACAGACAAACAAAAACTCTTCATTGAGCCAACAATATTGTTGAATCCTCCGATGGATGCCGATATCATGACCGAAGAAATCTTCGGTCCCCTGTTACCAATAATCACATTGAACAAAATTGAAGAAAGCATTGAGTTCATCAACTCAAGACCAAAACCTCTAGCTCTCTACGCCTTCACCGAAGACGAAACTCTCAAGAAACGGATTCTATCGGAAACGTCTTCGGGAAGTGTCACATTCAATGATACCATGGTTCAGTTCGTGTGCGATTCGCTACCGTTTGGGGGTGTCGGTCAGAGCGGTTTCGGGAGTTACCATGGCAAGTATTCTTTTGATACATTTAGCCATGAAAAAGCAGTGTTGCAGAGAAGCTATTTGCTAGAACTCGAGCCACGATATCCGCCATGGAACGATTTCAAGCTCAAGTTCATTAGATTGGCGTATCGATTCGACTATTTCGGGCTGGCACTTCTCCTTTTGGGGTTAAAAAAGTAG 1434 44.21 MEANFEELRQSFRSGRTRSLEWRKNQLISLIQFIHDKENAIFEALYQDLGKHPVEIFRDEVGVVLKSANNALCCLKKWMAPQKKYVPLLFFPAKGEVLSEPFGLVLIISSWNFPLSLALDPLIGAISAGNTAVLKPSEYAPACSSFLAATLPLYLDNKAIKVVEGGADVSEQLLQHKWDKIFFTGSPKVARIVMSAAAKHLTPVTLELGGKCPAIFDYSSVHTNMKVAVKRIVGGKWGPCSGQACIGIDYVLVEDKFASELIESIKRILKKFYGENSKNSASLARIVNEQHVERISNLLNDPKVAASIVHGGSTDKQKLFIEPTILLNPPMDADIMTEEIFGPLLPIITLNKIEESIEFINSRPKPLALYAFTEDETLKKRILSETSSGSVTFNDTMVQFVCDSLPFGGVGQSGFGSYHGKYSFDTFSHEKAVLQRSYLLELEPRYPPWNDFKLKFIRLAYRFDYFGLALLLLGLKK 477
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
5 39221682 39223935 - Lag0019152.1 Lac5g2068 608710
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lac5g2068 477 FunFam Aldehyde dehydrogenase 9 219 - -
Lac5g2068 477 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 210 413 IPR016163 GO:0016620(InterPro)
Lac5g2068 477 Pfam Aldehyde dehydrogenase family 6 433 IPR015590 GO:0016491(InterPro)
Lac5g2068 477 PANTHER ALDEHYDE DEHYDROGENASE 3 473 IPR012394 GO:0004029(PANTHER)|GO:0005737(PANTHER)|GO:0006081(PANTHER)|GO:0006081(InterPro)
Lac5g2068 477 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 9 431 IPR016162 GO:0016491(InterPro)
Lac5g2068 477 FunFam Aldehyde dehydrogenase 210 413 - -
Lac5g2068 477 SUPERFAMILY ALDH-like 2 449 IPR016161 GO:0016491(InterPro)
Lac5g2068 477 PIRSF ALDH 1 470 IPR012394 GO:0006081(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac2g0944 Lac-Chr2:7442545 Lac5g2068 Lac-Chr5:39221682 1.50E-133 dispersed
Lac5g2068 Lac-Chr5:39221682 Lac9g2833 Lac-Chr9:46347141 5.00E-167 dispersed
Lac5g2068 Lac-Chr5:39221682 Lac11g0932 Lac-Chr11:10144511 2.80E-37 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac5g2068 K00128 - csv:101221321 842.032