Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lac5g2127 | ATGGGCCTAGGTGGCTGCATTGCTCAGGCAGGATTCAGTTTCACAACGACGTCGTACATGTGCTTCATGTTCTCGGTGACGACGCCGATGGGGATAGTGTTGGGAATAGTACTGTTTTCAATTATAGGTTACGACGACAGCAGTCCGAAAGCTCTGATAATGGAGGGTTTATTGGGTTCGTTTTCATCTGGGATTCTCATATACATGGCTCTTGTTGATCTAATAGCCGTTGATTTTTTCCACAACAAGATGATGAGCTCGAATCAACGGCTGAAGAAGGCTTCTTTTATTGCCTTGTTGCTTGGGTCTGCTTCCATGTCGGTTTTAGCTATTTTTCAAATCCTACCTATTTTTTTTAGTCATATATCTCGTTGCCCCAATATAAATCAAACCCAAGACCAAATAATTGAACCCAAGACCAATAAAGCCCAAGGCCAAGTTGTTAGGCCCAAAAGTCACTAG | 462 | 42.86 | MGLGGCIAQAGFSFTTTSYMCFMFSVTTPMGIVLGIVLFSIIGYDDSSPKALIMEGLLGSFSSGILIYMALVDLIAVDFFHNKMMSSNQRLKKASFIALLLGSASMSVLAIFQILPIFFSHISRCPNINQTQDQIIEPKTNKAQGQVVRPKSH | 153 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 39874205 | 39874735 | - | Lag0019211.1 | Lac5g2127 | 608769 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lac5g2127 | 153 | Pfam | ZIP Zinc transporter | 1 | 110 | IPR003689 | GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro)|GO:0055085(InterPro) | |
| Lac5g2127 | 153 | PANTHER | ZINC/IRON TRANSPORTER | 1 | 112 | - | GO:0005385(PANTHER)|GO:0005886(PANTHER)|GO:0016020(PANTHER)|GO:0071577(PANTHER) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lac5g2127 | Lac-Chr5:39874205 | Lac9g2377 | Lac-Chr9:42934231 | 4.20E-51 | dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lac5g2127 | K14709 | - | csv:101214729 | 191.815 |