Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac5g2146 ATGATTATCAAACGGGACTTTAATCCGACATCAAAAAAAGTTCCCAATTTATACACTTTCCATTTCCGCAAATGTAGCACGTGCAAAGAGTTCCTCAGATTGTCCATTTTTGCGAATGGCAGTCCTCCCAAAGCTGCCGACCCATTTGACTACGGCGGTGGAGTGGTGGACCCGAACGCTGCCATCGACCCAGGTCTCATCTACGATCTGGACACCATGGATTACATACATTACCTTTGTGGCATGGGTTATAAGGGCTCAGATATTTCTCAACTAACGCAGCAAAAGACAGAGTGCCCGTTTCCGAGGCCGTCCGTGTTGGATTTGAATTTGCCGACCATTACAGTACCTGAACTTAGAGACTCCACCACTGTGACGAATGTAGGGAACGTGACCTCCATTTATAGGGCAGTGATCGAGGCTCCACCTGCCTCCAAGGTCAATGTCGAGCCCCAGATATTGGCCTTTAACTCCAAAGTGAGGAAGATCTCGTTTAAGGTTACCTTTTCCACTGTCCTCCAAAAGAATTATGGATACTCTTTTGGGAGCTTAACGTGGACTGATGGAGTGCATCTTGTTAAAACTCCTTTGACTGTGCGAATTGATTTCTTTTGA 615 46.18 MIIKRDFNPTSKKVPNLYTFHFRKCSTCKEFLRLSIFANGSPPKAADPFDYGGGVVDPNAAIDPGLIYDLDTMDYIHYLCGMGYKGSDISQLTQQKTECPFPRPSVLDLNLPTITVPELRDSTTVTNVGNVTSIYRAVIEAPPASKVNVEPQILAFNSKVRKISFKVTFSTVLQKNYGYSFGSLTWTDGVHLVKTPLTVRIDFF 204
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 40014410 40015024 + Lag0019230.1 Lac5g2146 608788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac5g2146 204 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 41 196 IPR045051 -
Lac5g2146 204 FunFam Subtilisin-like protease SBT1.5 79 202 - -
Lac5g2146 204 Gene3D Peptidase S8/S53 domain 44 75 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Lac5g2146 204 Pfam Fibronectin type-III domain 108 199 IPR041469 -
Lac5g2146 204 Gene3D - 79 202 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac5g2142 Lac-Chr5:39993991 Lac5g2146 Lac-Chr5:40014410 5.60E-64 dispersed
Lac5g2146 Lac-Chr5:40014410 Lac5g2153 Lac-Chr5:40081132 2.00E-72 dispersed
Lac5g2146 Lac-Chr5:40014410 Lac5g2150 Lac-Chr5:40058986 1.40E-73 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac5g2146 - - - 0.0