Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac5g2150 ATGGTGAACAGCCAAGGTCGTTTGATTGTTGGTGTTATGACAATTTATGCTTTGTTTTCAATGTTTGCCTACAAACCCATGGCCGAAGCTGATGATCAAACTCGCAAGGTTTACATCGTTTACCTCGGAGAAAGGCAATACGATGATATTAATTTAACAACTGAGTCTCACCATGATTTACTGGCCACTGTATTGGGAAGCAAGGAGAAATCGTCGGAATCAATGGTGTACAGTTATAGACATGGCTTTTCTGGCTTTGCAGCCAAGCTCACCAAGTCTCAGGCTCAACAACTAGCTGAAATGTCTGGGGTGGTTCGAGTTCTTCCAAATTCACTTCACAAAATGCAGACAACAAGAAGTTGGGATTTTCTTGGGCTCTCCTCGTCTCCCTCTGACTCTAATCTTCTCCATCGAGGTAAAATGGGTGAAAATATCATTATAGGTGTCATTGATTCAGGAATTTGGCCGGAGTCGGAAGCATTCAATGACAGAGGGTTGGGTCCAGTCCCATCAAGATGGAAAGGCAAGTGTGAATCAGGAGAAGAATTCAATTCCACAAATTGCAACAGAAAAATCATAGGAGCACGTTGGTTCGTGAAGGCCTTCATCGCGGACCATGGGCGGGAGGCATTGGCTAACGACTACTTATCTCCACGAGACATCAGCGGACACGGAACCCACGTTGCCAGCACGGCTGCAGGTTCATTCGTGGCGAATGTCAGCTACCACGGCCTTGGTGTTGGTACGCTGAGGGGCGGAGCCCCACGAGCGCGGTTGGCCATATACAAGGTCTTGTGGACGAGAGGGGGAGCGACAGGAGACATAATGAAGGCCATAGATGAGGCCATTCACGACGGAGTCGATGTGATATCGATGTCGATTGGAGGTTCGGGTCTATTGCTTCCCGACTTCAATGAACTTGGCGGAGTTGCAATTGGTTTGTTTCATGCTATTGCGAGGGGGATTTCTGTGGTGTGTGCTGGTGGAAATGATGGGCCTCTTCAGCAGACGGTGCAGAACGCTGCGCCTTGGATTTTGACTGTGGCTGCGAGTACCATGGATAGAGCTTTTCTTGCCTCCATTACTCTTCAAGATAACACCACTTATTTGGGCCAAACCTTGTTCTCTGCGAAAAAGGACATTGTCGGCCAGTTATTCGCGGCTCCAAGATGTGATGGCATTTTTGGAAATGAAACTTTCTTAAGTGGGAAGGTGGTTCTCTGCTTTTCTAATGGAGTCGACAGGAAGACTATATCGGACACGGTGACAGCGGCGGCGGACGCGGTGGCGAGAGCAAATGGGAGGGGGATAATTATTGCCGGCCAACAGAACGATATCTTGCCACCCTATGCATTTCCATACATCCTCGTGGATCCCGACGTTGGCACAAAATTATACTTTTACTCCTTGGAAAACAGTAATCCATTGGTAAGATTGAGTGGAGCAAGAACCATCGTCGGCAAGCCACTATCATCCAAGATAGCCTATTTCTCATCCAGAGGTCCAAATTCTGTTTCCCCCGCAATTCTCAAGCCAGACATAGCTGCTCCTGGATCCAACATTCTAGCTGCTGTTCCACCTAACATTCCCAACGACAAAGGGTTTGGCATGAATTCAGGAACTTCCATGGCTGCACCTCATATTTCTGGTATTGTGGCTCTTCTCAAATCCCTGCATCCTACTTGGTCACCCGCTGCCATTAAATCAGCCCTCATCACCACAGCACGTGCAAATGACCTTTCTGGATTGCCCATTTTTGCCGAGAACTCTCCACCTAAAGTTGCCGACCCATTCGACTACGGTGGTGGAGTGGTAGACCCCAACGCTGCCGCCGACCCAGGCCTCGTCTACGATTTGGACACCACAGATTACATATATTACGTTTGCGCCATGGGTTATGAGGGCTCATACATTTCTCAGCTAACGCAGCAAAAAACAGAATGTCCATTGCAAAGGCCTTCGGTTTTGGATTTGAATTTGCCCACCATTACAATACCTGCACTCATGAACTCCACCACTGTGACTCGGACTGTGACAAATGTAGGGAACTTGACCTCCATTTATAGGGCAGTGATCGAGGCTCCACCCGGAACCAAGGTGAGTGTTGAGCCTCCAGAGTTGGCTTTTAGTTCCCAAGTGAAGAAGATTTCCTTTAAGGTTACAATTTCCACTGCCCTCTATACAAACTATGGCTACTCTTTTGGAACCTTAACTTGGACCGATGGAGTGCATTTTGTCAAAAGTCCTTTGTCTGTGCGAATTAATTTCCTTTGA 2274 47.76 MVNSQGRLIVGVMTIYALFSMFAYKPMAEADDQTRKVYIVYLGERQYDDINLTTESHHDLLATVLGSKEKSSESMVYSYRHGFSGFAAKLTKSQAQQLAEMSGVVRVLPNSLHKMQTTRSWDFLGLSSSPSDSNLLHRGKMGENIIIGVIDSGIWPESEAFNDRGLGPVPSRWKGKCESGEEFNSTNCNRKIIGARWFVKAFIADHGREALANDYLSPRDISGHGTHVASTAAGSFVANVSYHGLGVGTLRGGAPRARLAIYKVLWTRGGATGDIMKAIDEAIHDGVDVISMSIGGSGLLLPDFNELGGVAIGLFHAIARGISVVCAGGNDGPLQQTVQNAAPWILTVAASTMDRAFLASITLQDNTTYLGQTLFSAKKDIVGQLFAAPRCDGIFGNETFLSGKVVLCFSNGVDRKTISDTVTAAADAVARANGRGIIIAGQQNDILPPYAFPYILVDPDVGTKLYFYSLENSNPLVRLSGARTIVGKPLSSKIAYFSSRGPNSVSPAILKPDIAAPGSNILAAVPPNIPNDKGFGMNSGTSMAAPHISGIVALLKSLHPTWSPAAIKSALITTARANDLSGLPIFAENSPPKVADPFDYGGGVVDPNAAADPGLVYDLDTTDYIYYVCAMGYEGSYISQLTQQKTECPLQRPSVLDLNLPTITIPALMNSTTVTRTVTNVGNLTSIYRAVIEAPPGTKVSVEPPELAFSSQVKKISFKVTISTALYTNYGYSFGTLTWTDGVHFVKSPLSVRINFL 757
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 40058986 40066940 + Lag0019234.1 Lac5g2150 608792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac5g2150 757 FunFam Subtilisin-like protease SBT1.5 628 755 - -
Lac5g2150 757 Pfam Fibronectin type-III domain 657 752 IPR041469 -
Lac5g2150 757 CDD Peptidases_S8_3 113 575 IPR034197 -
Lac5g2150 757 FunFam Subtilisin-like protease SBT5.3 27 116 - -
Lac5g2150 757 Gene3D Peptidase S8/S53 domain 144 624 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Lac5g2150 757 Gene3D - 354 486 - -
Lac5g2150 757 Gene3D - 628 755 - -
Lac5g2150 757 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 23 116 IPR037045 -
Lac5g2150 757 ProSitePatterns Serine proteases, subtilase family, serine active site. 540 550 IPR023828 -
Lac5g2150 757 Pfam Peptidase inhibitor I9 37 112 IPR010259 -
Lac5g2150 757 PRINTS Subtilisin serine protease family (S8) signature 220 233 IPR015500 -
Lac5g2150 757 PRINTS Subtilisin serine protease family (S8) signature 142 161 IPR015500 -
Lac5g2150 757 PRINTS Subtilisin serine protease family (S8) signature 539 555 IPR015500 -
Lac5g2150 757 ProSiteProfiles Serine proteases, subtilase domain profile. 120 611 - -
Lac5g2150 757 Pfam Subtilase family 142 578 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Lac5g2150 757 CDD PA_subtilisin_like 360 479 - -
Lac5g2150 757 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 37 749 IPR045051 -
Lac5g2150 757 ProSitePatterns Serine proteases, subtilase family, histidine active site. 224 234 IPR022398 -
Lac5g2150 757 SUPERFAMILY Subtilisin-like 18 680 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Lac5g2150 757 FunFam Subtilisin-like protease SBT1.5 144 364 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac5g2139 Lac-Chr5:39988111 Lac5g2150 Lac-Chr5:40058986 1.80E-83 dispersed
Lac5g2143 Lac-Chr5:39995883 Lac5g2150 Lac-Chr5:40058986 9.10E-68 dispersed
Lac5g2150 Lac-Chr5:40058986 Lac5g2154 Lac-Chr5:40085966 0.00E+00 dispersed
Lac5g2146 Lac-Chr5:40014410 Lac5g2150 Lac-Chr5:40058986 1.40E-73 proximal
Lac5g2149 Lac-Chr5:40033267 Lac5g2150 Lac-Chr5:40058986 5.10E-211 tandem
Lac5g2150 Lac-Chr5:40058986 Lac5g2151 Lac-Chr5:40071926 1.50E-271 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac5g2150 - - - 0.0