Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac5g2153 ATGACTTTCATTTCCACAAATATAGCACGTGCAAAGGACCTTTCTGGATTGCCCATTTTTGCCGAGAGCTCTCCTCCTAAAGTTGCTGACCCGTTCGACTACGGTGGTGGAGTGGTGGACCCCAACGCTGCCATCGACCCAGGCCTCATTTACGATTTGGACACCACAGATTACATATATTACCTTTGCGCCATGGGTTTTGAGAGCTCAGACATTTCTCAGCTAACGCAGCAAAAAATAGAGTGTCCGTTGCAAAAGCCTTCGGTTTGGGATTTGAATTTGCCGACCATTACAATACCTGCACTCACGAAGAACTCCATCACTGTGACTCGGACTGTGACAAATGTAGGGAACTTGACTTCCATTTATAGGGCAGTGATCGAGCCTCCACCTGGAACCAAGGTGAGTGTTGAGCCTCCAGAGTTGGCTTTTAGTTCCCAAGTGAAGAAGATTTCCTTTAAGGTTACAATTTCCACTGCCCTCTATACAAACTATGGCTACTCTTTTGGAACCTTAACTTGGACCGATGGAGTGCATCTTGTCCAAAGTCCTTTGTCTGTGCGAATTGATTTCCTTTGA 579 46.11 MTFISTNIARAKDLSGLPIFAESSPPKVADPFDYGGGVVDPNAAIDPGLIYDLDTTDYIYYLCAMGFESSDISQLTQQKIECPLQKPSVWDLNLPTITIPALTKNSITVTRTVTNVGNLTSIYRAVIEPPPGTKVSVEPPELAFSSQVKKISFKVTISTALYTNYGYSFGTLTWTDGVHLVQSPLSVRIDFL 192
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 40081132 40081710 + Lag0019237.1 Lac5g2153 608795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac5g2153 192 Gene3D - 62 190 - -
Lac5g2153 192 Pfam Fibronectin type-III domain 91 187 IPR041469 -
Lac5g2153 192 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 26 184 IPR045051 -
Lac5g2153 192 Gene3D Peptidase S8/S53 domain 28 58 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Lac5g2153 192 FunFam Subtilisin-like protease SBT1.5 62 190 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac5g2146 Lac-Chr5:40014410 Lac5g2153 Lac-Chr5:40081132 2.00E-72 dispersed
Lac5g2153 Lac-Chr5:40081132 Lac5g2155 Lac-Chr5:40110721 2.80E-60 dispersed
Lac5g2153 Lac-Chr5:40081132 Lac5g2154 Lac-Chr5:40085966 2.20E-73 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac5g2153 - - - 0.0