Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac5g2154 ATGGGAAACAACCAAGCTTCTTTCGTTGATGCCGTCATGACATTTTATGCTTTGTTTTCACTGTTTTTTGCCTACAAATCCATGGCCGAAGCTGATGACCAAACTCGCAAGGTTCACATCGTTTACCTCGGAGAAAGTCAATACGATGATACTAAATTGACAACTAATTCTCACCATGAATTATTGGCCAGTGTCTTGGGAAGCAAGGAGAAGTCGTTGGAATCAATGGTGTACAGTTATAGACATGGCTTTTCTGGATTTGCAGCCAAGCTTACTAAGTCCCAGGCTCACAAGATAGCTGAAATGGCAGAGGTGGTTAGAGTTTTTCCAAATTCACTCTACAAAATGCAGACTACAAGAAGTTGGGATTTTCTTGGGCTCTCCTCTTCTCCCTCCAAATCCAACCTTCTTCATCTAAGTAAAATGGGTGACAATGTCATTGTAGGCATCATTGACTCAGGAATCTGGCCGGAGTCGAAAGCTTTTGGAGACAAAGGATTAGGTCCAATACCATCGCGATGGAAAGGCACTTGTGAATCAGGAGCATATTTCAACTCCTCAAACTGCAACAGAAAAATCATAGGCGCACGTTCGTACTCAAAGGCCTTCATTGCCGACTACGGCCAAAAGGCATTAACCAACGAATACATATCCCCACGAGACGCCAATGGGCACGGAACCCATGCAGCTAGCACAGCCGCAGGTTCATTCGTAAGGAACGTTGGCTACCTAGGCCTTGGTGTTGGTACGCTGAGGGGTGGCGCCCCTCGAGCGCGGTTGGCCATATACAAGGCCTTGTGGACGAGTGGGGGCGTGGGGGCGACGGGAGACATATTGAAGGCCATAGATCAGGCCATTCACGACGGAGTCGATGTGATATCGATGTCGCTCGGAGGTTCGATTCCATTGTTTCCGGAGTTCAGCGAACTTAACGAGGTTGCAATTGGTTCGTTTCATGCCAGTGGGAAGGGGATTTCTGTGGTGTGTTCGGGTGGAAATGAAGGCCCCAACAAGCAAAGGGTTGTGAATACAGCGCCTTGGATTTTGACTGTGGCTGCGAGTACCATGGATAGAGCTTTTCTTGCTTCCATTATTCTTCCAGATAACACTACTTATTTGGGCCAAGCCTTGTTCTCTGCCAAAAAGGACATCGTCAGTGAGTTGACTTGTTCGACGACTGGACGGTTATGCTCATGCGAGGGCATTTCGGGAAATGACACGTCCCTCAGTGGGAAGGTGGTCCTCTGCTTCTCTGCATTAGCCGATGTGGCTGCGAGGGTGGCGGCGGTGGTGGCGGTAAAAAAAGCAAACGGAACTGGGCTTATTATGGCCGGCCAACACGATGATATCTTATTTCCATGTGGTGAAGACTTCCCATGCATCGTAGTCGAACCAGATGTTGCCACAAAAATGTTTTTCGCCTTGGTCGACGGCTATCCAATAGTAAGGGTGAGCACTTCAAGAACCATCATCGGCAAGCCTATATCAACCAAGATAGCCTATTTCTCATCTAGAGGTCCGAATTCTGCTTCACCTGCAATTCTCAAGCCAGACATAGCAGCGCCTGGATCGAACATTTTAGCGGCGGTTTCTCCACACAACGCTTTGAACGACAAAGGGTTTGCATTACTGTCGGGAACTTCAATGGCTGCGCCTCATATCTCCGGCATTGTGGCTCTTCTTAAATCTCTTCATCCTACTTGGTCGCCCGCCGCCATTAAATCAGCTCTCGTCACCACTGCATGGACAAAGGACCCTTCGGGAGCGCCCATTATGGCGGAGAGCTCTCCCCCCAAACTCGCCGACCCATTCGACTACGGTGGTGGAGTGGTGAACCCCAACGCCGCGGCTGACCCTGGCCTCGTTTACGATCTGGACACCACAGATTACATATATTATTACCTTTGTGCCATGGGTTACAAGGTCTCAGACATTTCTCACCTCACAAAGAAAAAAACTAAATGCCCTCTACGCAAACCCTCAGTCTTGGATTTGAATTTGCCGACCATTACAATACCTGCGCTCACAAACTCCACCACTGTGACTCGGACCGTGACCAATGTAGGGAACTCGACCTCGATTTATAGGGCAATGATCGAGGCTCCACTCGGCACCAAGGTCAGTGTCAAGCCTCGAGTGTTGGCCTTCAACTCCAAAGTCAAAAAGATTTCTTTTAAGGTTACCATTTCCATTTCCATCCATAGGAATTATGGGTATTCTTTTGGATCCTTGACTTGGACTGATGGAATGCATCTCGTCAAGAGTCTCTTGTCCGTACAAAATGATCTCCTTTGA 2295 48.37 MGNNQASFVDAVMTFYALFSLFFAYKSMAEADDQTRKVHIVYLGESQYDDTKLTTNSHHELLASVLGSKEKSLESMVYSYRHGFSGFAAKLTKSQAHKIAEMAEVVRVFPNSLYKMQTTRSWDFLGLSSSPSKSNLLHLSKMGDNVIVGIIDSGIWPESKAFGDKGLGPIPSRWKGTCESGAYFNSSNCNRKIIGARSYSKAFIADYGQKALTNEYISPRDANGHGTHAASTAAGSFVRNVGYLGLGVGTLRGGAPRARLAIYKALWTSGGVGATGDILKAIDQAIHDGVDVISMSLGGSIPLFPEFSELNEVAIGSFHASGKGISVVCSGGNEGPNKQRVVNTAPWILTVAASTMDRAFLASIILPDNTTYLGQALFSAKKDIVSELTCSTTGRLCSCEGISGNDTSLSGKVVLCFSALADVAARVAAVVAVKKANGTGLIMAGQHDDILFPCGEDFPCIVVEPDVATKMFFALVDGYPIVRVSTSRTIIGKPISTKIAYFSSRGPNSASPAILKPDIAAPGSNILAAVSPHNALNDKGFALLSGTSMAAPHISGIVALLKSLHPTWSPAAIKSALVTTAWTKDPSGAPIMAESSPPKLADPFDYGGGVVNPNAAADPGLVYDLDTTDYIYYYLCAMGYKVSDISHLTKKKTKCPLRKPSVLDLNLPTITIPALTNSTTVTRTVTNVGNSTSIYRAMIEAPLGTKVSVKPRVLAFNSKVKKISFKVTISISIHRNYGYSFGSLTWTDGMHLVKSLLSVQNDLL 764
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 40085966 40099247 + Lag0019238.1 Lac5g2154 608796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac5g2154 764 FunFam Subtilisin-like protease SBT5.3 27 117 - -
Lac5g2154 764 FunFam Subtilisin-like protease SBT1.5 145 366 - -
Lac5g2154 764 CDD Peptidases_S8_3 114 582 IPR034197 -
Lac5g2154 764 Gene3D Peptidase S8/S53 domain 145 630 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Lac5g2154 764 FunFam Subtilisin-like protease SBT1.5 635 762 - -
Lac5g2154 764 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 24 117 IPR037045 -
Lac5g2154 764 ProSiteProfiles Serine proteases, subtilase domain profile. 121 617 - -
Lac5g2154 764 Pfam Fibronectin type-III domain 664 759 IPR041469 -
Lac5g2154 764 ProSitePatterns Serine proteases, subtilase family, serine active site. 546 556 IPR023828 -
Lac5g2154 764 Pfam Subtilase family 143 585 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Lac5g2154 764 SUPERFAMILY Subtilisin-like 19 689 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Lac5g2154 764 PRINTS Subtilisin serine protease family (S8) signature 143 162 IPR015500 -
Lac5g2154 764 PRINTS Subtilisin serine protease family (S8) signature 221 234 IPR015500 -
Lac5g2154 764 PRINTS Subtilisin serine protease family (S8) signature 545 561 IPR015500 -
Lac5g2154 764 Pfam Peptidase inhibitor I9 38 116 IPR010259 -
Lac5g2154 764 Gene3D - 635 762 - -
Lac5g2154 764 Gene3D - 357 491 - -
Lac5g2154 764 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 39 754 IPR045051 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac5g2145 Lac-Chr5:40012457 Lac5g2154 Lac-Chr5:40085966 9.40E-42 dispersed
Lac5g2150 Lac-Chr5:40058986 Lac5g2154 Lac-Chr5:40085966 0.00E+00 dispersed
Lac5g2151 Lac-Chr5:40071926 Lac5g2154 Lac-Chr5:40085966 1.20E-223 dispersed
Lac5g2154 Lac-Chr5:40085966 Lac5g3083 Lac-Chr5:48529492 5.10E-206 dispersed
Lac6g2278 Lac-Chr6:39944003 Lac5g2154 Lac-Chr5:40085966 3.30E-24 dispersed
Lac5g2153 Lac-Chr5:40081132 Lac5g2154 Lac-Chr5:40085966 2.20E-73 tandem
Lac5g2154 Lac-Chr5:40085966 Lac5g2155 Lac-Chr5:40110721 4.60E-247 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac5g2154 - - - 0.0