Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac5g2191 ATGGCTTCGAATACTACAGCAGTGACCAAATGTCCCTCTCCAATGAAAGCAACATCAAACGGCATTTTCCAGGGCGATAATCCTCTTGATTTTGCCCTCCCTCTTGTCATTCTGCAAATATGTTTGGTAGTCGTACTTACTCGTGGTCTTGCTTTTCTTCTGAGGCCGTTAAAACAACCACGAGTGATTGGAGAAATTATTGGAGGAATACTTCTTGGTCCATCAGCTCTTGGACGTAACAAGAACTTTCTTCATATGATATTTCCGTCCAGTAGTATCACATTGTTAGATACTATAGCTAATATTGGATTGTTATTCTTTCTCTTTCTTGTGGGCCTTGAGTTAGATCTAAAGTCAATACGTCGTACTGGAAAGAAGGCCCTTGGAATTGCCATTACTGGAATCGGCCTTCCCTTTGCTTTAGGAATTGGATCATCGTTTGTCCTCCGAGGAACCATATCCAAAGGTGTAAATGCTTCTGCATTTCTCATATTCATGGGAGTTGCACTTTCGATAACAGCATTTCCCGTCTTAGCTCGTATCCTTGCCGAGCTTAAACTTCTAACCACTGACGTTGGCAGAATGGCTATGTCTGCTGCAGCAGTGAACGACGTAGCTGCCTGGATTCTCCTTGCTCTTGCCATTGCATTATCTGGTTCGGATAAATCTCCCCTAACTGCTGTTTGGGTCCTTTTATCTGGCTGTGCCTTTGTTGTTGCCGCTATTGTCATTTTATCCCCAGTTTTCAAATGGATGTCCAAACAATGTTTTCAAGGGGAGCCGGTACGTGAGATCTACATATGCGCTACATTAGCTATTGTCCTAGCTGCTGGATTTGCCACAGATTTTATTGGGATACATGCTATGTTTGGAGCTTTTGTTGTTGGAGTGTTAGTTCCGAAGGATGGACCATTAGTAGGTGCTTTGGTAGAGAAAATAGAGGATCTTGTTTCTGGTCTATTCCTGCCTCTTTATTTTGTGTCAAGTGGTTTGAAGACTAATGTAGCCACAATTCAAGGGGCACAGTCCTGGGGTCTTCTAGTTTTAGTTATAGTTACGGCCTGTTTCGGAAAAATCTTTGGCACTTTTCTCGTGTCCATTCTATGTAAAGTACCTGTTCGTGAGGCTCTCGCGTTAGGATTTCTAATGAACACAAAAGGTTTGGTGGAGCTTATTGTTCTCAATATTGGAAAAGACAGAAAGGTTTTAAATGACCAGACCTTTGCAATAATGATTCTAATGGCTCTTTTTACTACTTTCATTACCACTCCCCTTGTCATTGCTGTATACAAGCCAGCGAGGAATGCCAAATTAGCCGATTATAAGCATAGGAAAATCGAACGAAAAAACAAGAATACGCAGCTGAGGATTTTGACCTGTTTCCATGGTGCAGGAAACATTCCATCGATTATAAATCTGCTCGAGGCCTCGAGAGGAATCGAGAAGGACGGAGAACTTTGTGTCTATGCAATGCATCTCATGGAGCTGTCCGAGAGGTCCTCAGCCATTTTAATGGTACATAAGGCCAGGAAAAACGGTTTGCCTTTCTGGAACAAGGGCCTGAGGTCGAATTCCAACCATGTTATCGTCGCGTTTGAAGCCTACCGACAACTGAGCAGAGTATTCATCCGACCAATGACAGCCATCTCCTCCATGTCTGACATGCATGAAGATATCTGCGCTACTGCTGAGAGGAAAAGAACTGCAATCATAATTCTTCCATTCCACAAGCACCTGAGGGTGGATGGTTCACTGGAGGCTACTCGAAGCAGCATCCGTGTAGTTAATCAGAACGTTCTCGAGCATGCTCCATGTTCAGTTGGAATTTTCATCGATCGTGGGTTGGGTGGAACGACCCATGTTTCATCGAGCAATGTTAAGTTTTTCATCACTGTTCTATTCTTTGGTGGTGGAGATGATCGCGAAGCGCTTTCTTATGGTTTTCGCATGGCCGAGCACCCTGGCATTAGATTGATGGTAATTCGTTTCTTCGTTGAACCCGAGCCTGTTGGGGAGATAGTCAGTGCTGATACTGTCGGGAATTCTTCTGCGATATCACTTTCTCAGGACGATGAATTTCTTTCTGAATTCAAGGACAGTGTGGACAAGAACGATTCCATCATATATGTAGAGAAAACCATAAAAAGTGCTGCAGAAGCAATGGATACAGTGCAGGAACTGAAAAGCTGCCATCTGTATCTCGTTGGCCGAACACCGGATATCAAAGCAACCTTTGACTTAAACAGAAGTGACTGCCCGGAGCTTGGTCCAGTTGGGAACCTGTTGACTTCACCAAACTTCCGGATTGCAGCATCAGTTTTGGTGGTGCAGCAATATCATTCTGAGTTACCGATGAGCTCGGCTTTAGATTCTGCTGAAGGAGAATCAGAATCAGCATAG 2400 43.83 MASNTTAVTKCPSPMKATSNGIFQGDNPLDFALPLVILQICLVVVLTRGLAFLLRPLKQPRVIGEIIGGILLGPSALGRNKNFLHMIFPSSSITLLDTIANIGLLFFLFLVGLELDLKSIRRTGKKALGIAITGIGLPFALGIGSSFVLRGTISKGVNASAFLIFMGVALSITAFPVLARILAELKLLTTDVGRMAMSAAAVNDVAAWILLALAIALSGSDKSPLTAVWVLLSGCAFVVAAIVILSPVFKWMSKQCFQGEPVREIYICATLAIVLAAGFATDFIGIHAMFGAFVVGVLVPKDGPLVGALVEKIEDLVSGLFLPLYFVSSGLKTNVATIQGAQSWGLLVLVIVTACFGKIFGTFLVSILCKVPVREALALGFLMNTKGLVELIVLNIGKDRKVLNDQTFAIMILMALFTTFITTPLVIAVYKPARNAKLADYKHRKIERKNKNTQLRILTCFHGAGNIPSIINLLEASRGIEKDGELCVYAMHLMELSERSSAILMVHKARKNGLPFWNKGLRSNSNHVIVAFEAYRQLSRVFIRPMTAISSMSDMHEDICATAERKRTAIIILPFHKHLRVDGSLEATRSSIRVVNQNVLEHAPCSVGIFIDRGLGGTTHVSSSNVKFFITVLFFGGGDDREALSYGFRMAEHPGIRLMVIRFFVEPEPVGEIVSADTVGNSSAISLSQDDEFLSEFKDSVDKNDSIIYVEKTIKSAAEAMDTVQELKSCHLYLVGRTPDIKATFDLNRSDCPELGPVGNLLTSPNFRIAASVLVVQQYHSELPMSSALDSAEGESESA 799
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 40501841 40504606 - Lag0019275.1 Lac5g2191 608833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac5g2191 799 FunFam Cation/H(+) antiporter 15 35 437 - -
Lac5g2191 799 Pfam Sodium/hydrogen exchanger family 47 425 IPR006153 GO:0006812(InterPro)|GO:0015297(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:1902600(InterPro)
Lac5g2191 799 Gene3D - 35 438 IPR038770 -
Lac5g2191 799 PANTHER CATION/H + ANTIPORTER 11 785 IPR050794 GO:0006885(PANTHER)|GO:0012505(PANTHER)|GO:0015672(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac1g2053 Lac-Chr1:42096130 Lac5g2191 Lac-Chr5:40501841 8.70E-193 dispersed
Lac5g2191 Lac-Chr5:40501841 Lac5g2193 Lac-Chr5:40534211 3.00E-302 dispersed
Lac5g2191 Lac-Chr5:40501841 Lac5g2192 Lac-Chr5:40523238 6.10E-303 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac5g2191 K26731 - csv:101223205 1364.36