Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac5g2192 ATGGCTACCAATGCGACGGCGGCCGGTGCATGTCCGGCGCCCATGAAGGCCACTTCCAACGGCGTTTTTCAGGGCGACAATCCTCTCAATTTCGCCCTTCCTCTCGCCATCCTTCAGATTTGTCTCGTCGTCCTCCTCACTCGCCTTCTCTCTTTTCTTCTTCGTCCCATTCGACAGCCACGTGTTATTGCTGAGATCGTCGGTGGAATCTTGCTGGGTCCGTCGGCGCTTGGCCGGAACGTGGAGTACTTGCACACAATTTTTCCGACGAGGAGCCTCACCGTTTTGGATACGTTGGCCAATTTGGGTCTTCTCTTCTTCCTGTTTCTCGTCGGCTTGGAGTTGGACCCCAAAGCCCTCCGCCGCACCGGGAAACGAGCGATGAGCATCGCCTGCGCCGGAATCACTCTCCCGTTCCTTCTCGGCATCGGCACCTCCTTCGTCCTCCGAGCAACCATCTCCAAAGGCGTCAATGAAGGCGCCTTCCTCGTCTTCATGGGCGTCGCTCTTTCCATCACTGCATTCCCTGTTTTGGCTCGAATTCTGGCCGAGCTCAAGCTTTTGACCACCGACGTAGGCCGGATGGCCATGTCCGCCGCCGCCGTCAACGATGTGGCGGCGTGGATTCTTTTGGCGTTGGCAATTGCACTCTCCGGTACTGGCAACTCCCCTCTGGTTTCCCTCTGGGTTTTCCTGTCCGGCGCTGGTTTTGTCCTGCTCTGTATCTTCGGTTTTCCGCCGTTGTTCCATTGGATGTCGCAACGGTGCTCCGAGGGCGAGCCGGTGAAGGAATTGTACATTTGTGCCACTCTATCGCTCGTTTTGGCTGCTGGGTTCCTCACGGATTTGATCGGAATCCACGCCCTGTTCGGAGCTTTCGTCGTTGGAGTTTTGGTTCCTAAAGAAGGCCCATTCGCCGGAGCTCTGGTTGAGAAAGTTGAGGATCTCGTCTCTGGTCTTTTTCTTCCTTTATACTTCGTTTCAAGTGGATTGAAAACGAACGTTGCAACAATTCAAGGAGCTCAATCATGGGGTCTTCTCGTTCTGGTCATCGTCACAGCCTGTGTTGGTAAAATCGTCGGAACTGTATCCGTTTCCCTGCTCTGCAAAATGACATTCGAAGAATCAGTCGCTTTGGGGGTCTTGATGAACACGAAAGGCTTGGTCGAATTGATCGTTCTAAACATCGGCAAAGACAGAAAGGTTTTGAATGATCAAACATTCGCCATTATGGTTCTAATGGCAATCTTCACAACGTTCATCACAACTCCGGTTGTGATAGCAGTTTACAAGCCGGCGAAAAGACAGAGCAAATCCGATTACAAGGATAGAACTATCCAGAGGGAAAATCCCAATTCCCAGCTCCGAATTCTGGCCTGTTTCCACTCCATCGACAACATTCCGGCGACGCTTAACCTCATCGAGGCCTCTCGAGGGATAGAAAAGAAAGAAGGGCTCTGTGTTTATGCTCTGCATCTAATGGAGCTAACAGAGAGATCCTCCGCCATTCTTATGGTTCACAAAGCAAGGAAAAACGGGGTCCCCTTTTGGAACAAAACCCGATCCAATTCGAACCAGATCGTCGTCGCCTTCGAAGCATTCCGGCAACTCAGCCGGGTCGTAATCCGGCCGATGACCGCCATTTCTGCTCTGACCAATATGCACGAAGATATCTGCAGCAGCGCCGAGAGCAAAAAAGCTGCCATTATAATACTCCCATTTCACAAACACCAAAGATTGGACGGATCTCTTGAGACCACGAGGACCGATTACCGGTGGGTCAACCGGAGAGTTCTGGAACAATCGCCTTGCTCCGTCGGAATCTTGATCGACAGAGGACTCGGCGGTGGGTCCCACGTGACCGCCAGTGATGTCGACTCCGCCATCACCGTCTTCTTCTTCGGCGGGCGTGACGACCGTGAGGCTCTGGCGTTCGGGAAAAGAATGGCGGAGCATCCCGGAATCAGCCTGCAGGTTGTCCGATTCACCCCCTCCACCGATTTCGCGTCGGAATCCGTCGTCGTCGACATAACCAACACCGATCCCGCCGATTCTCCCGACTCCGGCGCCGACGAACGGGCGTTGGCGTCGATTGTGTATGAAGAGAGGAACGTGAGCAAAGGGAGCCACGCCATTGAAGCGATGAAGGAGTTCGGTAAATGCAATTTGATTCTGGTCGGAAGAATGCCGGAGGGGGAAGTTGTGAGGAGTTTGGGCGTGAGCAATCTGGAGTGTTCGGAGCTTGGGCCCGTCGGCGGGGCGTTGGCGTCGCCGGAGTTCTCGACGACGGCGTCGGTGCTGGTGGTGCAGCAGTTTTGCGGTCAGGTACCGGTGCAGATGGACATGGATTCGACTTACAAAGGGGAGTCGACGACTGAAGACGACCGTTAA 2391 53.99 MATNATAAGACPAPMKATSNGVFQGDNPLNFALPLAILQICLVVLLTRLLSFLLRPIRQPRVIAEIVGGILLGPSALGRNVEYLHTIFPTRSLTVLDTLANLGLLFFLFLVGLELDPKALRRTGKRAMSIACAGITLPFLLGIGTSFVLRATISKGVNEGAFLVFMGVALSITAFPVLARILAELKLLTTDVGRMAMSAAAVNDVAAWILLALAIALSGTGNSPLVSLWVFLSGAGFVLLCIFGFPPLFHWMSQRCSEGEPVKELYICATLSLVLAAGFLTDLIGIHALFGAFVVGVLVPKEGPFAGALVEKVEDLVSGLFLPLYFVSSGLKTNVATIQGAQSWGLLVLVIVTACVGKIVGTVSVSLLCKMTFEESVALGVLMNTKGLVELIVLNIGKDRKVLNDQTFAIMVLMAIFTTFITTPVVIAVYKPAKRQSKSDYKDRTIQRENPNSQLRILACFHSIDNIPATLNLIEASRGIEKKEGLCVYALHLMELTERSSAILMVHKARKNGVPFWNKTRSNSNQIVVAFEAFRQLSRVVIRPMTAISALTNMHEDICSSAESKKAAIIILPFHKHQRLDGSLETTRTDYRWVNRRVLEQSPCSVGILIDRGLGGGSHVTASDVDSAITVFFFGGRDDREALAFGKRMAEHPGISLQVVRFTPSTDFASESVVVDITNTDPADSPDSGADERALASIVYEERNVSKGSHAIEAMKEFGKCNLILVGRMPEGEVVRSLGVSNLECSELGPVGGALASPEFSTTASVLVVQQFCGQVPVQMDMDSTYKGESTTEDDR 796
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 40523238 40526093 - Lag0019276.1 Lac5g2192 608834
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac5g2192 796 FunFam Cation/H(+) antiporter 15 35 437 - -
Lac5g2192 796 Gene3D - 35 440 IPR038770 -
Lac5g2192 796 Pfam Sodium/hydrogen exchanger family 44 425 IPR006153 GO:0006812(InterPro)|GO:0015297(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:1902600(InterPro)
Lac5g2192 796 PANTHER CATION/H + ANTIPORTER 11 772 IPR050794 GO:0006885(PANTHER)|GO:0012505(PANTHER)|GO:0015672(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac5g2192 Lac-Chr5:40523238 Lac9g0210 Lac-Chr9:3239579 1.70E-204 dispersed
Lac5g2191 Lac-Chr5:40501841 Lac5g2192 Lac-Chr5:40523238 6.10E-303 tandem
Lac5g2192 Lac-Chr5:40523238 Lac5g2193 Lac-Chr5:40534211 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac5g2192 K26731 - csv:101202937 1246.88