Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac5g2285 ATGTCAGCGTATGTGATTCTGTTGTGTATGAAGAACATTGTTAACAGTTTGATGTTTTCTCTTCTTTCTTGTCTGTTCCTCTGTTCTTGGAAGAAGATGGCCAGAGAAAACTTTGGTTTCTGGCTATTTATGATTGCATCTCTACTGCTTTTCCTCAAAGCACAGTGTATTAATGTGGGGATTACTTATGTTCAAGAAGCTGGTGCCAAGGGAGCTGTTTGTTTGGATGGAAGTCCTCCAGCTTATCACTTCAGCGACGGGTTCGGCGCTGGGATTGACAATTGGTTGATTCAACTTGAGGGAGGAGGATGGTGCAACAATGTCACAACTTGCCTCCAGCGCAGGGACACTCGTTTAGGTTCATCTAGGAAAATGGTCACTGAGCTTGCGTTCTCAGGAATTTTGAGCAATAAACAAAAATTCAATCCGGATTTTTATAATTGGAACAGAATCAAGGTTCGTTACTGTGATGGAGCTTCTTTTACCGGAGACGTTGAAGCCGTTGATCCTGCTACCAATCTGCATTTCAGAGGAGCAAGAGTTTTTCGTGCTATCGTCGATAACCTACTCGCCAAAGGAATGAAAAATGCGAAAAACGCTATTCTCTCTGGTTGTTCCGCGGGTGGATTAAGTTCCATCTTGCATTGTGATAACTTCAAATCTTTACTTCCTCCTACTACTAAAGTAAAGTGCCTCTCAGATGCAGGATACTTTATCAATGCGAAAGACGTCTCAGGAGCACAGCATATTGAGGACTTCTATGGTGATGTAGTTGCCACCCATGAATTTGCCTGTATCATGCACTTCAAAATGAAACCTGAGATGTGTTTCTTTCCCCAAAATGTAGTTCAGCTCATTCAAACTCCAATCTTCCTTGTAAATGCAGCTTATGATTCATGGCAGATAAAGAACATTCTGGCGCCTGGCGTTGCCGATCCACACGGTACTTGGCATGACTGCAAGCTCGACATAAAAAACTGCTCGCCTATTCAGCTTCGAATCATGCAAGATTTCAGGGTTCAGTTTTTGAGTGCATTGAATGGTGTTGGAAGCTCTTTATCAAGAGGATTGTTCATAGATTCTTGCTATGCCCATTGCCAAACCGAAATGCAGGAGACATGGTTAAGAGAAGATTCTCCCATGCTGAGTAAGACGCCCATTGCAAAGGCAGTTGGAGACTGGTTTTTCGACAGGAGTCCGTTCCAGAAGATCGACTGTCCTTACCCTTGCAATCCGACTTGCCACAACCGCATTTTCGACGTGAAAGACAACCTTGAATGA 1281 43.4 MSAYVILLCMKNIVNSLMFSLLSCLFLCSWKKMARENFGFWLFMIASLLLFLKAQCINVGITYVQEAGAKGAVCLDGSPPAYHFSDGFGAGIDNWLIQLEGGGWCNNVTTCLQRRDTRLGSSRKMVTELAFSGILSNKQKFNPDFYNWNRIKVRYCDGASFTGDVEAVDPATNLHFRGARVFRAIVDNLLAKGMKNAKNAILSGCSAGGLSSILHCDNFKSLLPPTTKVKCLSDAGYFINAKDVSGAQHIEDFYGDVVATHEFACIMHFKMKPEMCFFPQNVVQLIQTPIFLVNAAYDSWQIKNILAPGVADPHGTWHDCKLDIKNCSPIQLRIMQDFRVQFLSALNGVGSSLSRGLFIDSCYAHCQTEMQETWLREDSPMLSKTPIAKAVGDWFFDRSPFQKIDCPYPCNPTCHNRIFDVKDNLE 426
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 41537541 41541144 + Lag0019369.1 Lac5g2285 608927
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac5g2285 426 Pfam Pectinacetylesterase 54 400 IPR004963 GO:0016787(InterPro)
Lac5g2285 426 PANTHER NOTUM-RELATED 47 416 IPR004963 GO:0009505(PANTHER)|GO:0016787(InterPro)|GO:0052793(PANTHER)|GO:0071555(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac3g3083 Lac-Chr3:49273258 Lac5g2285 Lac-Chr5:41537541 1.60E-124 dispersed
Lac5g2285 Lac-Chr5:41537541 Lac5g2938 Lac-Chr5:47439695 1.20E-108 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac5g2285 K19882 - csv:101214431 747.273