Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lac5g2295 ATGTTCTCCGCCGTCGTCGCCTTCTTCTTCCTCTTCTTCTTCCATTCCCTCTTCAAATTCTCCGCCGCCGCCCGCCGGAAACTCCCCCTTCCGCCGGGCTCAATGGGCTGGCCTTACATGGGTGAAACCCTCCAACTCTACTCTCAAGATCCCAATGTCTTCTTTGCCTCCAAAAAGAAGAGGTATGGTCCTATTTTCAAGTCCCACATATTGGGTTATCCTTGTGTGATGGTTTCAAGCCCTGAAGCTGTCAAGTTTGTGTTGGTCACTAAAGCTCATCTCTTTAAGCCTACATTTCCAGCTAGTAAAGAGAGGATGTTGGGCAAAAATGCTATCTTCTTTCACCAAGGTGATTACCATGCCAAATTGAGACGCCTCGTCCTCCGAACTTTCATGCCCGAGGCCATCAGAAACATCGTCCCGAGCATCGAGTCCATTGCCAAGAACACCGTTCAATCTTGGGATGGCCAATTGATCAACACCTTCCAAGAAATGAAGATGTTCGCATTCGAGGTTTCGTTGCTTTCGATATTCGGAAAAGACGAAGCTCTTTACTTCGAAGACCTCAAGCGATGCTACTACATTCTCGAAAAAGGCTACAATTCGATGCCGATAAACTTGCCCGGAACACTCTTCCACAAGGCCATGAAAGCAAGGAAGGAACTAGCACATATCTTGAACAAGATCCTCACAACCAGGAGGGAAATGAAGCGCGACTACAACGACCTCCTCGGATCTTTCATGGGTGAAAAGGAAGGCCTCACAGACGAACAGATCGCCGATAACGTCATCGGTCTCATCTTCGCCGCTCGCGACACGACCGCCAGTGTTCTAACATGGATCTTGAAGTACCTAGGAGAAAACCCAAGTGTTCTTCAAGCTGTCACTGCTGAACAAGAAGCAATAATGAAAGAAAAACAGAGTGGAGGAGATGATAATCTCACCTGGGCTGACACCAAAAACATGCCAATCACTTCAAGGGTGATTCAAGAAACTCTAAGAGTGGCCTCAGTTTTATCATTTACTTTCAGAGAAGCAGTGGAAGATGTTGAATTTGATGGATATTTGATCCCAAAAGGATGGAAAGTTTTGCCTCTCTTCAGAAACATTCATCACAGCCCAGAAATTTTCCCTCAGCCTGAAAAGTTTGATCCTTCAAGATTTGAGGTTGCTCAAAAACCCAATACTTACATGCCATTTGGCAATGGGACCCACTCCTGTCCAGGAAATGAATTAGCCAAGCTGGAGATGCTGGTTCTACTCCATCATTTAACCACCCAGTACAGGTGGAATGTAGTGGGAGAACAAGAAGGGATTCAATATGGTCCATTTGCTCTTCCACACAATGGATTGCCCATTAGAATCTCTCTAAAGAAGTAA 1380 45.87 MFSAVVAFFFLFFFHSLFKFSAAARRKLPLPPGSMGWPYMGETLQLYSQDPNVFFASKKKRYGPIFKSHILGYPCVMVSSPEAVKFVLVTKAHLFKPTFPASKERMLGKNAIFFHQGDYHAKLRRLVLRTFMPEAIRNIVPSIESIAKNTVQSWDGQLINTFQEMKMFAFEVSLLSIFGKDEALYFEDLKRCYYILEKGYNSMPINLPGTLFHKAMKARKELAHILNKILTTRREMKRDYNDLLGSFMGEKEGLTDEQIADNVIGLIFAARDTTASVLTWILKYLGENPSVLQAVTAEQEAIMKEKQSGGDDNLTWADTKNMPITSRVIQETLRVASVLSFTFREAVEDVEFDGYLIPKGWKVLPLFRNIHHSPEIFPQPEKFDPSRFEVAQKPNTYMPFGNGTHSCPGNELAKLEMLVLLHHLTTQYRWNVVGEQEGIQYGPFALPHNGLPIRISLKK 459
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
5 41621638 41623796 - Lag0019379.1 Lac5g2295 608937
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lac5g2295 459 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 400 409 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Lac5g2295 459 Gene3D Cytochrome P450 20 457 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac5g2295 459 SUPERFAMILY Cytochrome P450 25 455 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac5g2295 459 PANTHER CYTOCHROME P450 26 29 428 - GO:0004497(PANTHER)|GO:0009687(PANTHER)|GO:0010295(PANTHER)|GO:0016125(PANTHER)|GO:0016491(PANTHER)|GO:0016709(PANTHER)
Lac5g2295 459 CDD CYP90-like 60 456 - -
Lac5g2295 459 FunFam Abscisic acid 8 20 457 - -
Lac5g2295 459 PRINTS E-class P450 group I signature 59 78 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac5g2295 459 PRINTS E-class P450 group I signature 258 275 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac5g2295 459 PRINTS E-class P450 group I signature 366 390 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac5g2295 459 PRINTS E-class P450 group I signature 397 407 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac5g2295 459 PRINTS E-class P450 group I signature 326 344 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac5g2295 459 PRINTS E-class P450 group I signature 407 430 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac5g2295 459 PRINTS E-class P450 group I signature 278 304 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac5g2295 459 PRINTS P450 superfamily signature 407 418 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac5g2295 459 PRINTS P450 superfamily signature 398 407 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac5g2295 459 PRINTS P450 superfamily signature 327 338 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac5g2295 459 PRINTS P450 superfamily signature 269 286 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lac5g2295 459 Pfam Cytochrome P450 31 435 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac2g1713 Lac-Chr2:15881027 Lac5g2295 Lac-Chr5:41621638 2.60E-79 dispersed
Lac4g1633 Lac-Chr4:35006530 Lac5g2295 Lac-Chr5:41621638 8.00E-148 dispersed
Lac5g2295 Lac-Chr5:41621638 Lac7g2750 Lac-Chr7:46655566 1.10E-158 dispersed
Lac5g2295 Lac-Chr5:41621638 Lac2g0312 Lac-Chr2:2326752 2.10E-154 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac5g2295 K09843 - csv:101212508 861.677