Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lac5g2316 | ATGGCAATGGCGGCGACTTCCCTTTCGAATCTGCCTTCTGCTGTCTTCCATGGAAATCTGCAAAGAAATGAATTTGGGTTTGTGGGTATGTCGAGACAGCCCGCCAAGTATCTCAAATCCAATCTCAGAGGTTCGGTTGTTAGATGCCAATCGAGTCAAGTTGATGAACCCAAAACAAAAAGAAATCTACTCGACAATGCAAGCAATCTCCTTACCAATTTGTTAAGTGGTGGAAATCTGGGATCTATGCCGATAGCTGAAGGTGCAGTCTCTGATTTGTTCGGCCGCCCACTCTTCTTTGCACTATATGATTGGTTCTTAGAGCATGGATCTGTTTATAAACTTGCCTTTGGACCAAAAGCCTTTGTTGTTGTGTCAGATCCCATTGTGGCAAGATATATTCTTCGAGAAAATGCATTTGGTTATGACAAGGGAGTGCTTGCCGATATTCTAGAACCGATAATGGGTAAAGGACTAATACCAGCTGACCTTGACACTTGGAAGCAGAGGAGACGAGTTATAGCTCCTGGATTCCATGCCTTATACTTGGAAGCTATGGCCAAAGTGTTTACTGACTGTTCAGAACGATCAATACTGAAGTTGGAGAAGCTTTTCGGAGATGGTGAACATCAGGAGGACAAAACCATTGAGTTGGATATGGAAGCAGAGTTTTCAAGTTTGGCTCTTGATATCATTGGACTTGGTGTTTTCAACTATGATTTTGGTTCTGTAACCAAAGAATCCCCCGTGATTAAGGCTGTATATGGAACCCTTTTTGAAGCAGAGCACAGATCAACTTTCTATATCCCATACTGGAAAGTACCTTTGGCAAGGTGGATAGTCCCAAGGCAGCGTAAATTCCATAGCGACCTTAAGGTTATTAACGACTGTCTTGATGGCCTGATACGAAACGCTAGAGAAACCCGAGAGGAAGCCGATGTTGAGAAATTGCAGCAAAGGGACTACTTAAATCTCAAGGATGCCAGTCTTTTGCGTTTCTTAGTTGATATGCGAGGAGCTGATGTCGATGATCGGCAGCTTAGGGACGATCTGATGACAATGCTTATTGCCGGCCATGAAACAACTGCTGCTGTGCTTACATGGGCTGTTTTTTTGCTTGCACAAAACCCTTCAAAAATGAAAAAGGCTCAAGCAGAGATTGATTTAGTTCTTGGCAAGGGAAGGCCAACTTTTGAATTACTTAAAGGATTGAAGTACATCAGACTTATCGTTGCAGAGAGTCTTCGTTTGTTTCCTCAGCCACCATTGCTAATAAGACGAGCTCTCAAACCGGATACATTGCCAGGAGGATACAATGGTGACAAAAATGGATATGCAGTTCCTGCAGGGACTGACATCTTCATCTCTGTTTACAATCTCCACAGATCTCCATACTTCTGGGATAACCCTCAAGAATTTGAACCAGAGAGATTTGAGGTAAAGAGGGCGAGCGAGGGGATCGAAGGATGGGACGGTTTCGACCCATCTAGAAGCCCCGGAGCTCTATATCCGAATGAGATAGTATCAGACTTTTCCTTCTTGCCATTTGGTGGAGGACCTAGAAAATGTGTGGGAGATCAATTTGCTTTAATGGAATCAACCATAGCACTGGCCATGTTGCTGCAAAAGTTTGATGTGGAACTAAAAGGAAGTCCAGAATCTGTGGAACTAGTCACTGGGGCCACTATACATACCAAAAGTGGGTTGTGGTGCAAACTGAGAAGAAGATTACAAGTAAATTGA | 1743 | 43.49 | MAMAATSLSNLPSAVFHGNLQRNEFGFVGMSRQPAKYLKSNLRGSVVRCQSSQVDEPKTKRNLLDNASNLLTNLLSGGNLGSMPIAEGAVSDLFGRPLFFALYDWFLEHGSVYKLAFGPKAFVVVSDPIVARYILRENAFGYDKGVLADILEPIMGKGLIPADLDTWKQRRRVIAPGFHALYLEAMAKVFTDCSERSILKLEKLFGDGEHQEDKTIELDMEAEFSSLALDIIGLGVFNYDFGSVTKESPVIKAVYGTLFEAEHRSTFYIPYWKVPLARWIVPRQRKFHSDLKVINDCLDGLIRNARETREEADVEKLQQRDYLNLKDASLLRFLVDMRGADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKMKKAQAEIDLVLGKGRPTFELLKGLKYIRLIVAESLRLFPQPPLLIRRALKPDTLPGGYNGDKNGYAVPAGTDIFISVYNLHRSPYFWDNPQEFEPERFEVKRASEGIEGWDGFDPSRSPGALYPNEIVSDFSFLPFGGGPRKCVGDQFALMESTIALAMLLQKFDVELKGSPESVELVTGATIHTKSGLWCKLRRRLQVN | 580 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 41818343 | 41825585 | + | Lag0019400.1 | Lac5g2316 | 608958 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lac5g2316 | 580 | Gene3D | Cytochrome P450 | 82 | 580 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac5g2316 | 580 | CDD | CYP97 | 100 | 570 | - | - | |
| Lac5g2316 | 580 | PANTHER | CYTOCHROME P450 FAMILY 4 | 72 | 576 | IPR050196 | GO:0009507(PANTHER) | |
| Lac5g2316 | 580 | PRINTS | P450 superfamily signature | 514 | 523 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac5g2316 | 580 | PRINTS | P450 superfamily signature | 523 | 534 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac5g2316 | 580 | PRINTS | P450 superfamily signature | 357 | 374 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac5g2316 | 580 | PRINTS | P450 superfamily signature | 409 | 420 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac5g2316 | 580 | Pfam | Cytochrome P450 | 106 | 566 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac5g2316 | 580 | SUPERFAMILY | Cytochrome P450 | 94 | 576 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac5g2316 | 580 | PRINTS | E-class P450 group I signature | 106 | 125 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac5g2316 | 580 | PRINTS | E-class P450 group I signature | 523 | 546 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac5g2316 | 580 | PRINTS | E-class P450 group I signature | 513 | 523 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac5g2316 | 580 | PRINTS | E-class P450 group I signature | 346 | 363 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac5g2316 | 580 | PRINTS | E-class P450 group I signature | 366 | 392 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lac5g2316 | 580 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 516 | 525 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lac5g1866 | Lac-Chr5:36920308 | Lac5g2316 | Lac-Chr5:41818343 | 5.50E-121 | dispersed | |
| Lac5g2316 | Lac-Chr5:41818343 | Lac9g1255 | Lac-Chr9:29086268 | 6.30E-31 | dispersed | |
| Lac5g2316 | Lac-Chr5:41818343 | Lac8g2821 | Lac-Chr8:45447759 | 3.80E-36 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lac5g2316 | K24543 | - | csv:101210292 | 1075.08 |