Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac5g2337 ATGTTGCTTCAAAACAGAGTTGCCATGGAGAAGAACAGTCTGACGACTAAAACTAGAAAGCTTCATGGGAAGCACGACTGCCAAAACATGCAACACTCACATTCCTATGGCATGGAGGTTTGGAAGAAGAAGAAGATGAAGGTGGTTTGGTTGATTGCAGTTCCAGTAATGGTGATTCTGATGTTACAGAGATTTTGGATGCTATCTTTGGACTTTAATCACCTCTGGACAACTGTTGCTCAACAGGGCTCCACGAACGATGACAAGTTCATCAATGGCCTTCTTCCTCCAAGCTTCAACGAAAAATCTTGCTTAAGCAGATACCAATTGAATCTCTACAGAAACCCCTCTCCCCACAAGCCTTCTTCCTCACTCCTCTCAAAGCTCCGCCGTTACGAAGCCCTCCACCGCCGCTGCGGCCCCAATTCACCTTCCTTCCGTCGAGCCCTTGCCGGTCTCACTTCACCCAGAAACTCCACAACCCCGCCGGACGACTGCAAATACACTGTCATTTTGACTCGCGATGGCCTCGGCAACTGGATTCTCGCCATAGTCTCTGCCTTCTTCTACGCCCTGCTCAATGACCGCATCCTTCTAATCGACCGAGGCAATGCTCTTGATGATCTCTTCTGCGAGCCCTTTCTTGGATCCTCTTGGCTTCTACCGTCGGATTTCCCTCTCCGCCGCGAATTTGGGTCGTTCCGCCAGTCCTTCCCGGGGTCTTTTGGCAACATTTTGAGAAATGGGATGATGAAGAAAACCATCGAAGATCTGCCTCCGGCTTATTTGTACCTTCATCTCTCTCACGATGCCGACGATTACGATAAACTCTTTTACTGCGACCGGCAGCAGAGTCTTCTGAAGAAGGTCCCATGGCTGATTATGGAAACGAATATCTATTTGGTTCCTGGGTTTTTTCTGGTTTCTTCTTTCAGAAAAGAGCTTGAGAAGCTCTTTCCGACGAAGGACACCGTGTTCCACCATCTCGGTCGGTACCTCTTCCACCCGACGAACGGCGTATGGGGACTGATTTCGAGATCTTACAAGCCGTATCTCGCCAGAGCGAACGAAATGGTTGGGATTCAGATTCGGGTTTTCGGGTCGGAATCCGGGTCAGTTCAGGATCAGATGAATCAGCTTCTAGCTTGCATACAGAAGAAGAAATTACTACCAGAGGTCGATTCGTCGTCGTCGGAGAAGACGAATTCCACCACTTCTCAGAGAGTGAAGGTTGTGTTGGTGACGTCTTTGAATTCTCAGTACTCGGAAACCCTAAAGGACATGTACTTGGAGCATCCGACTGTCAATGGCGAGGTGGTTGCAGTGTACCAACCGAGTCACGAGGGGGTTCAGAGCTCCGACAAGATGCTGCACAACCGGAAGGCGCTGGCGGAGATATACCTCCTGAGCCTGAGCGATGTGCTGGTGACGAGCGATTGGTCGACGTTTGGGTATGTGGCGCGGGGACTAGCCGGAGTTAAGCCATGGATGCTGTACAAGGCGGAGGAGAAGGTGTATGAGACGTTGCAGTCATGGTTGAAGTACAGAAAGAGGAAAGAGATGACCGGTGATTGGCCGTGCCGGCGAGCGGTGTCGATGGAACCTTGCTCCCACACGCCGCCGGTGTGCGATTGTGATGAGATGAAGAGAAGAGATGGGGGGAATGATTTGCCATTTGTGACGCATTGTGAAGATGTGAGTTGGGGCCTCAAGTTGGTTGATAGAGATTAG 1731 50.55 MLLQNRVAMEKNSLTTKTRKLHGKHDCQNMQHSHSYGMEVWKKKKMKVVWLIAVPVMVILMLQRFWMLSLDFNHLWTTVAQQGSTNDDKFINGLLPPSFNEKSCLSRYQLNLYRNPSPHKPSSSLLSKLRRYEALHRRCGPNSPSFRRALAGLTSPRNSTTPPDDCKYTVILTRDGLGNWILAIVSAFFYALLNDRILLIDRGNALDDLFCEPFLGSSWLLPSDFPLRREFGSFRQSFPGSFGNILRNGMMKKTIEDLPPAYLYLHLSHDADDYDKLFYCDRQQSLLKKVPWLIMETNIYLVPGFFLVSSFRKELEKLFPTKDTVFHHLGRYLFHPTNGVWGLISRSYKPYLARANEMVGIQIRVFGSESGSVQDQMNQLLACIQKKKLLPEVDSSSSEKTNSTTSQRVKVVLVTSLNSQYSETLKDMYLEHPTVNGEVVAVYQPSHEGVQSSDKMLHNRKALAEIYLLSLSDVLVTSDWSTFGYVARGLAGVKPWMLYKAEEKVYETLQSWLKYRKRKEMTGDWPCRRAVSMEPCSHTPPVCDCDEMKRRDGGNDLPFVTHCEDVSWGLKLVDRD 576
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 42041121 42043367 + Lag0019421.1 Lac5g2337 608979
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac5g2337 576 Gene3D - 346 510 - -
Lac5g2337 576 PANTHER FUCOSYLTRANSFERASE 2-RELATED 43 574 IPR004938 GO:0005794(PANTHER)|GO:0008107(InterPro)|GO:0008417(PANTHER)|GO:0009969(PANTHER)|GO:0016020(InterPro)|GO:0042546(InterPro)
Lac5g2337 576 Pfam Xyloglucan fucosyltransferase 83 545 IPR004938 GO:0008107(InterPro)|GO:0016020(InterPro)|GO:0042546(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac5g2337 Lac-Chr5:42041121 Lac5g2338 Lac-Chr5:42048607 6.20E-297 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac5g2337 K13681 - csv:101222105 843.573