Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac5g2357 ATGAGCAAACAAGAAGAGGTGGTTTTGTTGGACATGAGGGTGAGCCCTTTTGCAATAAGGGTGAGGGTGGCTTTGGCAGAGAAGGGGATAAAATATGAGGCAAAAGAGGAAGATTTGAGCAACAAAAGCCCTTTGCTTTTGGAGATGAACCCTTTGTACAAGCAAGACCCAGTTTTGATTCACAAAGGGAAGCCCATTATTGAGTCTGTTATTATTGTTGAATATATTGATGAGGTTTGGAGTGATGAGGGAGCTTCTGCTAATTTGCTTCCTTCTCATCCTTATGAGAGATCCCATGCTAGGTTTTGGGCTGACTATGTGGACAAGAAGATTTATCCCATTGGAAGTAAGCTGTGGAATAGAGAGAAGACAGAAGAGGAGAAAGAAGCAGCAGGAAAGGAAGTGTTGGAGAGCTTTAAGGAGCTAGAAGAAGAGCTTGGAGAAAAGGCCTATTTTGGAGGACAATCATTTGGGGTCATAGATATTGCTCTCATTCCATTTTACAGTGTGTTTCTTGTATTCAAATTGCTTGGAAAATTGGACTTAGAAGCTGAATGTCCCAACATCTTACAATGGGCCAAGAGGTGCACCCAAAGGGAGAGTGTCTCAAACAATCTTCCTACTCAACAAGAGGTTTACGATGTCGTTTTGGATATCCTAGGACTTGAGCATTGA 675 42.07 MSKQEEVVLLDMRVSPFAIRVRVALAEKGIKYEAKEEDLSNKSPLLLEMNPLYKQDPVLIHKGKPIIESVIIVEYIDEVWSDEGASANLLPSHPYERSHARFWADYVDKKIYPIGSKLWNREKTEEEKEAAGKEVLESFKELEEELGEKAYFGGQSFGVIDIALIPFYSVFLVFKLLGKLDLEAECPNILQWAKRCTQRESVSNNLPTQQEVYDVVLDILGLEH 224
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 42244555 42245866 - Lag0019441.1 Lac5g2357 608999
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac5g2357 224 SUPERFAMILY GST C-terminal domain-like 79 217 IPR036282 -
Lac5g2357 224 FunFam Tau class glutathione S-transferase 1 88 - -
Lac5g2357 224 SFLD Main (cytGST) 3 215 - -
Lac5g2357 224 CDD GST_N_Tau 7 80 - -
Lac5g2357 224 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 5 84 IPR004045 -
Lac5g2357 224 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 6 215 IPR045073 GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER)
Lac5g2357 224 Pfam Glutathione S-transferase, N-terminal domain 7 78 IPR004045 -
Lac5g2357 224 SFLD Main.3: Omega- and Tau-like 3 215 IPR045073 -
Lac5g2357 224 Gene3D - 93 222 - -
Lac5g2357 224 SUPERFAMILY Thioredoxin-like 7 112 IPR036249 -
Lac5g2357 224 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 93 215 IPR010987 -
Lac5g2357 224 CDD GST_C_Tau 94 219 IPR045074 GO:0004364(InterPro)|GO:0006749(InterPro)
Lac5g2357 224 Gene3D Glutaredoxin 3 92 - -
Lac5g2357 224 Pfam Glutathione S-transferase, C-terminal domain 112 200 IPR004046 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac5g2357 Lac-Chr5:42244555 Lac5g2359 Lac-Chr5:42260253 9.80E-65 dispersed
Lac5g2357 Lac-Chr5:42244555 Lac5g2358 Lac-Chr5:42255000 1.20E-57 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac5g2357 K00799 - mdm:103427999 267.314