Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac5g2358 ATGGCGGACGAAGTGAAGCTGTTGGATTTTTGGCCCAGCATGTTCGGGATGCGAGTCAGAATAGCCCTGGCGGAGAAGGGCGTGGCCTACGAATATGTGGACGAAGATCTGAGGAACAAGAGCCCTTTGCTTCTGCAGATGAACCCAGTTTACAAGAAGATCCCTGTTCTTGTTCATAATGGAAAACCCATCTGTGAATCTTCCATTATCGTTCAGTATATCGATGAAGTCTGGAAGGATAAAGCTCCTTTGTTGCCGTCTGATCCTTATCAGAGGGCTCAGGCCAGGTTCTGGGTGGATTTCATCGACAAAAAGCTTTTTGATTGTGGGAGGAAGATTTGGGCAACCAAAGGGGAGGAACATGAAGCAAGCAAGAAGGAGTTGATAGAAATTTTGAAGCAATTGGAAGAAGTTGTTGGAGAGAAGGCTTACTTTGGAGGTGATTGCTTGGGATTTGTAGACATTGTTTTGATTGGATACTACACTTGGTTTTATACATATGAAACCATTGGAAACTTCAGCCTTGAGGCTGAGTGTCCCAAGACAGTGGCTTGGGCCAAGAGATGCTTGCAAAAGGACAGTGTTTCAAAGTCCTTGCCTGACCCCAAGAAGGTCTATGACTTTGTGCTTCAAATGATGAAAAAGTATGGCCTTGACTGA 660 45.0 MADEVKLLDFWPSMFGMRVRIALAEKGVAYEYVDEDLRNKSPLLLQMNPVYKKIPVLVHNGKPICESSIIVQYIDEVWKDKAPLLPSDPYQRAQARFWVDFIDKKLFDCGRKIWATKGEEHEASKKELIEILKQLEEVVGEKAYFGGDCLGFVDIVLIGYYTWFYTYETIGNFSLEAECPKTVAWAKRCLQKDSVSKSLPDPKKVYDFVLQMMKKYGLD 219
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 42255000 42256797 - Lag0019442.1 Lac5g2358 609000
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac5g2358 219 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
Lac5g2358 219 CDD GST_C_Tau 89 212 IPR045074 GO:0004364(InterPro)|GO:0006749(InterPro)
Lac5g2358 219 Coils Coil 118 138 - -
Lac5g2358 219 SUPERFAMILY GST C-terminal domain-like 76 216 IPR036282 -
Lac5g2358 219 Gene3D Glutaredoxin 1 87 - -
Lac5g2358 219 SUPERFAMILY Thioredoxin-like 5 106 IPR036249 -
Lac5g2358 219 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 216 IPR010987 -
Lac5g2358 219 FunFam Tau class glutathione S-transferase 1 87 - -
Lac5g2358 219 Pfam Glutathione S-transferase, N-terminal domain 5 76 IPR004045 -
Lac5g2358 219 Gene3D - 88 219 - -
Lac5g2358 219 Pfam Glutathione S-transferase, C-terminal domain 116 191 IPR004046 -
Lac5g2358 219 CDD GST_N_Tau 5 78 - -
Lac5g2358 219 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 4 209 IPR045073 GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER)
Lac5g2358 219 FunFam Glutathione S-transferase U20 88 219 - -
Lac5g2358 219 SFLD Glutathione Transferase (cytosolic) 2 217 IPR040079 -
Lac5g2358 219 SFLD Main.3: Omega- and Tau-like 2 217 IPR045073 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac5g2358 Lac-Chr5:42255000 Lac5g2361 Lac-Chr5:42272851 5.20E-103 dispersed
Lac5g2357 Lac-Chr5:42244555 Lac5g2358 Lac-Chr5:42255000 1.20E-57 tandem
Lac5g2358 Lac-Chr5:42255000 Lac5g2359 Lac-Chr5:42260253 6.30E-101 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac5g2358 K00799 - csv:101217848 391.349