Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac5g2360 ATGGCGGACGAAGTGAAACTGTTGGATCTTTGGGCTAGCATGTTCGGGATGCGAGTCAGAGTAGCCCTGGCCGAGAAGGGCGTGGCCTACGAATATGTGGATGAAGATCTGAGCAACAAGAGCCCTTTGCTTCTGCAGATGAACCCAATTCACAAGAAGATCCCTGTTCTTGTTCATAATGGAAAACCCATCTGTGAATCTTCCATTATCGTTCAGTATATCGATGAAGTCTGGAAGGATAAAGCTCCTTTGTTGCCGTCTGATCCTTATCAGAGGGCTCAGGCCAGGTTTTGGGTGGATTTCCTCGACAAGAAGTTCTATAATGCTTCGAGGAAGATATGGTGTGGCAAGGAGGAGGCTGAGCATGAGGAAGGCAAGAAGGAGGTGATAGAAATTTTGAAGCAATTGGAAGAAGTTGTTGGGGAGAAGGCTTACTTTGGAGGTGATTGTTTGGGAATTGTAGACATTGCTTTGATTGGATACTACCCTTGGTTTTATACCTTTGAAACCATTGGGAACTTCAGCATTGAGGCTGAGTGTCCAAAGACATTGGCTTGGGCTAAGAGATGCTTGCAAAAGGACAGTGTTTCAAAGTCACTGGCTGATCCCATGAAGCTCTATGACTTTGTGCTTCAATACAGGAAAGATCTTGGCATTGACTAA 663 45.25 MADEVKLLDLWASMFGMRVRVALAEKGVAYEYVDEDLSNKSPLLLQMNPIHKKIPVLVHNGKPICESSIIVQYIDEVWKDKAPLLPSDPYQRAQARFWVDFLDKKFYNASRKIWCGKEEAEHEEGKKEVIEILKQLEEVVGEKAYFGGDCLGIVDIALIGYYPWFYTFETIGNFSIEAECPKTLAWAKRCLQKDSVSKSLADPMKLYDFVLQYRKDLGID 220
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 42267690 42269202 - Lag0019444.1 Lac5g2360 609002
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac5g2360 220 Gene3D Glutaredoxin 1 87 - -
Lac5g2360 220 Pfam Glutathione S-transferase, N-terminal domain 5 76 IPR004045 -
Lac5g2360 220 Pfam Glutathione S-transferase, C-terminal domain 113 192 IPR004046 -
Lac5g2360 220 SUPERFAMILY Thioredoxin-like 5 107 IPR036249 -
Lac5g2360 220 Gene3D - 88 220 - -
Lac5g2360 220 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
Lac5g2360 220 FunFam Glutathione S-transferase U20 88 220 - -
Lac5g2360 220 CDD GST_C_Tau 89 213 IPR045074 GO:0004364(InterPro)|GO:0006749(InterPro)
Lac5g2360 220 SFLD Main.3: Omega- and Tau-like 2 217 IPR045073 -
Lac5g2360 220 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 217 IPR010987 -
Lac5g2360 220 SUPERFAMILY GST C-terminal domain-like 76 215 IPR036282 -
Lac5g2360 220 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 4 210 IPR045073 GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER)
Lac5g2360 220 SFLD Main (cytGST) 2 217 - -
Lac5g2360 220 CDD GST_N_Tau 5 78 - -
Lac5g2360 220 FunFam Tau class glutathione S-transferase 1 87 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac5g2360 Lac-Chr5:42267690 Lac8g1986 Lac-Chr8:38265850 1.30E-66 dispersed
Lac5g2359 Lac-Chr5:42260253 Lac5g2360 Lac-Chr5:42267690 2.00E-102 tandem
Lac5g2360 Lac-Chr5:42267690 Lac5g2361 Lac-Chr5:42272851 1.20E-104 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac5g2360 K00799 - csv:101217848 352.058