Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac5g2365 ATGTATTATCGTAGAGTTATGGAGGGGTTCGTCGTCCTAACAATACCTGCTAAGAAGCATCGACACTTTAGTTTGGCTAGCATGTCCGTGTTGGACATCGAACACTTGGACACTCCAACACTTGTGGATATGAGACATGGACCTGCAGAAGAAACGCTAAAATCACTTATTGCAAATGGTGAAGCTTGCAGCTATGATTATGTTTTTGTTGATGCTGACAAGAATTTGTACGAGGAATTCTTTGAACTGTTGCTACAACTGGTGAGAGTTGGAGGAGTGATTGTCATTGACAATGTCCTTTGGAGTGGAAAGGTTGCTGACCCAATGGTAACTGATGAGAGGACCATTAGCATCCAAAAATTCAACGAAAAGATAATGAAAGACGATCGAATCAATATCAGTATGGGCATATCGTTATTCGACATGGGGCTGCGTGTTTTGTCATACCCACAAAGGAATCTGCTGATGAAGTTCTCATCTCTGTCCCCAGTTACTGCAATTGCCAGGATCAAAATTGTCCGAGGGGCTTTGTCTTGCAGGTGTGTTGGTTGTCAATTGAACTTGGATGATTTCAGCTGCAAGAAGAGCCAGTTGGAAAGAGTTTACTCCACCAATTCAAATGGGAAGTTTAGCAATAAGCAGTTTATTAGTCTTGATCCACGGATTTATGAGTATGTTCTCTCCAATGTTCGTGAGCCTGAGATCCTAGGGCAACTTCGTGAGGAGACTGCCTCCATGCATGGTAGCAAAATGCAGGTATCTCCTGATCAAGCACAACTTCTTGCAATGCTTGTTCAGATTCTTGGTGCAAAGCGGTGCATTGAAGTGGGCGTTTACACTGGATATTCGTCCTTGGCCGTAGCGCTAGTCCTGCCGGAATCAGGGCGTTTAGTTGCCTGTGAAAGAGATATCAAATATCTCGAGGTTGCTAAAAGATATTATGAACTTGCTGGTGTTTCACACAAAGTGGATGTGAGACATGGGCTTGCAGCAGATACACTCAAATCACTTATTGCAAATGGTGAAGCTTGCAGCTATGATTTTGCGTTCATTGATGCCGAGAAGAGGATGAACGAGGAATACTTTGAACTCCTACTGCAACTGGTGAGGGTTGGAGGTTTAATTGTGATTGACAATGTCCTTTGGTATGGAAAAGTAGCTGACCCGACGGTAAATGACAAGAAGACTGATAGCATTAGGAGATTGAATAAAAAGATAATGGAAGACGATCGAGTCGGGATAAGTATGGTGCCCATTGGAGATGGCATGACAATTTGCCAAAAGAGATGA 1290 43.1 MYYRRVMEGFVVLTIPAKKHRHFSLASMSVLDIEHLDTPTLVDMRHGPAEETLKSLIANGEACSYDYVFVDADKNLYEEFFELLLQLVRVGGVIVIDNVLWSGKVADPMVTDERTISIQKFNEKIMKDDRINISMGISLFDMGLRVLSYPQRNLLMKFSSLSPVTAIARIKIVRGALSCRCVGCQLNLDDFSCKKSQLERVYSTNSNGKFSNKQFISLDPRIYEYVLSNVREPEILGQLREETASMHGSKMQVSPDQAQLLAMLVQILGAKRCIEVGVYTGYSSLAVALVLPESGRLVACERDIKYLEVAKRYYELAGVSHKVDVRHGLAADTLKSLIANGEACSYDFAFIDAEKRMNEEYFELLLQLVRVGGLIVIDNVLWYGKVADPTVNDKKTDSIRRLNKKIMEDDRVGISMVPIGDGMTICQKR 429
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 42299511 42307606 - Lag0019449.1 Lac5g2365 609007
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac5g2365 429 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 41 134 IPR029063 -
Lac5g2365 429 CDD AdoMet_MTases 272 377 - -
Lac5g2365 429 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 1 150 IPR002935 GO:0008171(InterPro)
Lac5g2365 429 Pfam O-methyltransferase 41 135 IPR002935 GO:0008171(InterPro)
Lac5g2365 429 Pfam O-methyltransferase 230 428 IPR002935 GO:0008171(InterPro)
Lac5g2365 429 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 212 429 IPR002935 GO:0008171(InterPro)
Lac5g2365 429 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 223 429 IPR029063 -
Lac5g2365 429 Gene3D Vaccinia Virus protein VP39 202 429 IPR029063 -
Lac5g2365 429 Gene3D Vaccinia Virus protein VP39 25 143 IPR029063 -
Lac5g2365 429 PANTHER O-METHYLTRANSFERASE-RELATED 216 428 IPR050362 GO:0008757(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac4g1636 Lac-Chr4:35063214 Lac5g2365 Lac-Chr5:42299511 4.90E-11 dispersed
Lac5g2365 Lac-Chr5:42299511 Lac2g1554 Lac-Chr2:13557880 1.00E-30 dispersed
Lac5g2365 Lac-Chr5:42299511 Lac5g2366 Lac-Chr5:42308297 3.00E-30 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac5g2365 - - - 0.0