Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac5g2434 ATGAGTCCAGCAAATTGTTTTTGGACAATATTCAAGCAACGGAAGGTGAAACATGTTACAAGCAATGGGGAACAGGTACATGTAGAGACAGGAAAATCCAATGGTTCCTTAAATGTAAAGAGTGAAGATCTAGCTGCGACTCGAATTCAAAATGCATTTCGAGCATTTGCGGCCAGAAAGGTTGTACATAATTCGAAAGGGCCAGAGAGATGTCAGGATCTAATTCAAGGTGAAATGGCTACAAAACAGGTGTTGAGCTTCATTCATTCATGGAGCAAAATGCAGCAAGAAATTAGAGCACGTAGACTCTGTATGGTCACAGAATATCGAGTCAAGCAAAAGAAACTGGAAAATCAGCAGAAGCTTGAGGCTAAGATTCATGAACTTGAGGTAGAATGGTGCGGTGGGTCTGAAACAAAAGAGGAAATACTTTTCAAGATTCAGCAACGAGAAGAAGCTGCTGTTAAACGGGAGCGAGCCATGGCTTATGCATTCTCTCATCAGTGGAGGGCCAACTCCATCTTAGATCTAAGTCCGGCTTCATACAGCCTTGACAAAGAAAACTGGGGATGGAGTTGGAAGGAGAGATGGATTGCTGCTCGGCCATGGGAGATCCGAGCTAATACTCATCCCACCATCCCAAAGAAGGTGCAGACGAAGCAAACAAGCAAACTCAATAAAGTCACGACACATCAACCGACATTGAAGGTCTCGAACTCAGCTAGACTTTCTTCGTCAAACAGTAAGGGGAGTTCAAAGGCCAGAAACTCTGCTATACCCAACTACTGA 789 43.85 MSPANCFWTIFKQRKVKHVTSNGEQVHVETGKSNGSLNVKSEDLAATRIQNAFRAFAARKVVHNSKGPERCQDLIQGEMATKQVLSFIHSWSKMQQEIRARRLCMVTEYRVKQKKLENQQKLEAKIHELEVEWCGGSETKEEILFKIQQREEAAVKRERAMAYAFSHQWRANSILDLSPASYSLDKENWGWSWKERWIAARPWEIRANTHPTIPKKVQTKQTSKLNKVTTHQPTLKVSNSARLSSSNSKGSSKARNSAIPNY 262
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 42959095 42967481 - Lag0019518.1 Lac5g2434 609076
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac5g2434 262 ProSiteProfiles IQ motif profile. 42 70 - -
Lac5g2434 262 MobiDBLite consensus disorder prediction 217 262 - -
Lac5g2434 262 Coils Coil 112 132 - -
Lac5g2434 262 PANTHER IQ-DOMAIN 5-RELATED 29 253 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac1g3383 Lac-Chr1:53405612 Lac5g2434 Lac-Chr5:42959095 4.50E-57 dispersed
Lac5g2434 Lac-Chr5:42959095 Lac8g2437 Lac-Chr8:42431493 5.50E-27 dispersed
Lac5g2434 Lac-Chr5:42959095 Lac3g1549 Lac-Chr3:14563680 1.90E-27 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac5g2434 - - - 0.0