Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac5g2477 ATGGAGAACCAGTTCTTTTCCGTTTTCCAAAGAAACCCATGTTTGTTTCTGGATCAAAGACCAAATGCTGTGCTCTTTCTTTTGATCTTCTTCTCTCTCACCTGCTCCTTCTCACCCTCCGATGGATATGACTCATTGGACCCTTATGCCAACGTTACAATCACATGGGATTTCTTGGTAGAGAATGGGGATACTTATGATGTGAGGGTTTCATTATACAATTTCCAACTGTTTCGCCATGTGGAGCTCCCCGGTTGGAAACTTGGTTGGTCATGGAAAGGTGATGAGGTTATATGGGGTATGTGGGGGGCAGAGGCTACTCAGCAAGGAAATTGCTCTAAATACATTGGCAGAGAGCTTCCTCATTGTTGTGAGAAGAAGCCTGTGATAGTTGATCTTATGCCTGGAGCTCCTTATAAATTGCAGGTGGCCAATTGTTGTAAAGGAGGTGTGCTATCTTCCATGAGACAAGACCCTACCAACTATGGAGCTTCCTTCCAAATGAATGTTGGGAAGTCTGCTGGAAAGGATGTAGATATCAAAATGCCGGCAAATTTCACTCTGGGGCTTCCTGGATATACTTGTAGTGACCCATTTCAAGTCTCTCCAACCAAGTTCAGTAAGGATGGCGGTCGCCGGTGGACGCAAGTTCTAGAAACATGGAATGTGACCTGCGTTTACTCACAATTTCGATCATCACCGTCACCGAGGTGCTGTGTTTCTTTGTCGTCCTTCTACAACAGCACCATTGTTCCTTGCCCTCAGTGCAGCTGTGGTTGCCAAGGGCTAGAGGGAACAAAATGTGTCAAGTTGGGTGAAACTCCTTCAGTTTTGCAACTGCCACATGAACATTACACTGCTGAAGTAGAACCATTGGTGAGGTGTTCAAAACACATGTGCCCAATAAGGGTGCATTGGCATGTGAAACAGAGTTATACACAGTATTGGAGGGTAAAGATAACAATCACAAATCTTAATTTTGCTAAGAATTACTCTCAATGGAACTTAGTAGCGATGCATCCCAACTTGAGGAATATTACTCAAGTTTTCAGCTTCAACTATAGCCCCCTCAATCAGTATGGTAACATTAATGACACAGGGATGTTTTGGGGGATACACTTCTACAATGACTTGTTACTCACATCAGGAGAGAGAGGAAATGTTCAAACAGAGATGCTTCTTCGAAAAGATTCAGAAATTTTCACTTTCAGAGAAGGATGGGCATTCCCAAGAAGAATTTTGTTCAATGGGGATGAATGTGTAATGCCACCTCCAGACCAATATCCAAGGCTCCCAAATAAAGCTCACAGGGCCATGGAAGCCTCATACATGTCATTTTCAGAGACCCTCGAGTACGATGAAGTGAGGCTTGTGAAGCAATGTACGGCTGAAAATAACTACTTTACCACACTGTTCGATGACCCAACTGGAACGTCGAAATATGTCGATCAACTCAGCCATAAAAACAGTTTAAACAAGTCCGAGTACATGGAGGAAGAGAGAGAAGAGAGAGTAGGCAAGCATTCCATCTGTAAAACAGGGATTTCATTGGAAATCATACAAGTTATTTCTCACCATGATGCATTACAGATACCACCTCCGGTAGGCCACACACCTCATGTAGAACAAACAAATACAACGGCAATGACCACCAGGTGCATGCATATGAAGATGTTAACTCCAGAAAAGGCAGGAAACAGCGGCAAAGAATTAAAAGGCAGAGAGGAGAGAGGCAGACAGGTACAAAGACTGGAAGAGATCAGCTTGTCTTGCACAAAGGGACGATCATTTTCATTCACCAATTTGGCAAAAATCACCCAGGCACAACACATTTGA 1836 43.57 MENQFFSVFQRNPCLFLDQRPNAVLFLLIFFSLTCSFSPSDGYDSLDPYANVTITWDFLVENGDTYDVRVSLYNFQLFRHVELPGWKLGWSWKGDEVIWGMWGAEATQQGNCSKYIGRELPHCCEKKPVIVDLMPGAPYKLQVANCCKGGVLSSMRQDPTNYGASFQMNVGKSAGKDVDIKMPANFTLGLPGYTCSDPFQVSPTKFSKDGGRRWTQVLETWNVTCVYSQFRSSPSPRCCVSLSSFYNSTIVPCPQCSCGCQGLEGTKCVKLGETPSVLQLPHEHYTAEVEPLVRCSKHMCPIRVHWHVKQSYTQYWRVKITITNLNFAKNYSQWNLVAMHPNLRNITQVFSFNYSPLNQYGNINDTGMFWGIHFYNDLLLTSGERGNVQTEMLLRKDSEIFTFREGWAFPRRILFNGDECVMPPPDQYPRLPNKAHRAMEASYMSFSETLEYDEVRLVKQCTAENNYFTTLFDDPTGTSKYVDQLSHKNSLNKSEYMEEEREERVGKHSICKTGISLEIIQVISHHDALQIPPPVGHTPHVEQTNTTAMTTRCMHMKMLTPEKAGNSGKELKGREERGRQVQRLEEISLSCTKGRSFSFTNLAKITQAQHI 611
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 43344014 43348588 + Lag0019561.1 Lac5g2477 609119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac5g2477 611 Pfam COBRA-like protein 66 228 IPR006918 GO:0010215(InterPro)|GO:0016020(InterPro)
Lac5g2477 611 PANTHER PROTEIN COBRA 28 444 IPR006918 GO:0010215(InterPro)|GO:0016020(InterPro)|GO:0046658(PANTHER)|GO:0052324(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac5g2477 Lac-Chr5:43344014 Lac8g2760 Lac-Chr8:44907949 8.40E-135 dispersed
Lac5g2477 Lac-Chr5:43344014 Lac3g0547 Lac-Chr3:4181393 4.60E-133 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac5g2477 - - - 0.0