Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac5g2480 ATGGGCAAAGGACCATTTTCTTTTCGCCGGAGCAGTAGTCGTCGCCGCCCTAAGAAGGCGGGTCAGTCATCACCGTCGTCGCCGCCCCAGCCACCTCCACCGATTGGTGTCAGTTCTCCTCCTATTAACAATAATGGCAGCGGCTTGGTTGGCGGCGGTGGTGGTGGTGGTGCTGTGGGAAAGGTGAAGAAGAAGGCTGGAGGAGCGAGGCTGTGGATGCGTTTGGACAGGTGGGGGCAGTCGGAGCTTGTAGAGTGGGACAAGGGCGCAATAATCCGACGCGCTGCAATTCCGACTAGGGATTTGAGAATTCTTGGTCCTGTTTTCTCCCACTCCTCTAACATACTCGCCAGGGAAAAGGCCATGGTTGTTAATTTAGAATTCATAAAAGCGATAGTTACTGCTGAAGAAGTCCTGCTACTTGACCCTCTTCGCCAAGAGGTTATTCCATTTGTGGATCAGTTAAGGAAGCTACTTGTTAAGAAGAGTCCATCTCAGGGCCATGGGGATGGAACTGTGGATGAACGTGAAAATGATGTGAATGTTTCACGGGGAGGAAAGTGGTTGCCAGTTTCGGAAGCTGTTGAAGGTGAAGCTGTTGAAGGTGTGCAGTATGAGCTCCCGTTTGAGTTTCAGGTTCTAGAAAATGCGTTGGAAGTTGTGTGTATGTACTTAGATTCCAGTGTGGCAGACCTTGAGAGAGATGCTTATCCAGTCCTGGATGAACTGGCTAGGAATGTCAGCACCAAGAATCTAGAACGTGTGAGGAGCTTGAAAAGTAATCTTACCCGTATTCTTGCACGTGTTCAGAAGGCATCTTATACTGCCTTGGTCCCTAACAATTGCCCCTCTTTGGAAAGCCGACGTCTCGGCGGTTGTGCACGGCGACGCTTCACTCAGCTGGTTCCGGTTAGCCCCTCCGCTGCCACTCCTCTCCGAAGCCGTCGACCGCCGGCTCTGGTACCAATTGTTAGGCATTCCATACTGCCTTGGTCCCCAACAGATAAGTTCCCAATTCTAGTGATAGATGAGCTATTGAATGAGCTTTGGGGCAACATACTTTGTAAGCTGGATCTCAAGTTGTGTTATCATCAAATTTGGATCTGCCTTGAGGATGTGCACAAGATTGTCTTGAGGATGTACCCAAGATTGTCCTACACACTATGGTTTCCAAAATATCTGAGAGCTGAGGATTTCATAGAAGCAGACCCTGGTAATAAGGCAGCAGGTGGTCTTTTATGTTACCCATGGGAGACCACCACTATGGATGGAGCACAACTTAAGCAGACTATCAAGGAAAGCAGAACTCCCTTTCCCACCTCTCAGTTAAAGATGAGTTGCGGCTCATGGGGCTTCTGCCCAAGGGGTCCCCTCTCATCTCTATTCTCTTCCAAGAGTATAAATATCAGACAATGTCACCTACTAGGGTGTTACAGCCTCTTCCTCTTCTTGTGA 1455 49.28 MGKGPFSFRRSSSRRRPKKAGQSSPSSPPQPPPPIGVSSPPINNNGSGLVGGGGGGGAVGKVKKKAGGARLWMRLDRWGQSELVEWDKGAIIRRAAIPTRDLRILGPVFSHSSNILAREKAMVVNLEFIKAIVTAEEVLLLDPLRQEVIPFVDQLRKLLVKKSPSQGHGDGTVDERENDVNVSRGGKWLPVSEAVEGEAVEGVQYELPFEFQVLENALEVVCMYLDSSVADLERDAYPVLDELARNVSTKNLERVRSLKSNLTRILARVQKASYTALVPNNCPSLESRRLGGCARRRFTQLVPVSPSAATPLRSRRPPALVPIVRHSILPWSPTDKFPILVIDELLNELWGNILCKLDLKLCYHQIWICLEDVHKIVLRMYPRLSYTLWFPKYLRAEDFIEADPGNKAAGGLLCYPWETTTMDGAQLKQTIKESRTPFPTSQLKMSCGSWGFCPRGPLSSLFSSKSINIRQCHLLGCYSLFLFL 484
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 43364428 43367232 - Lag0019564.1 Lac5g2480 609122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac5g2480 484 FunFam Magnesium transporter MRS2-1 60 143 - -
Lac5g2480 484 Pfam Magnesium transporter MRS2-like 85 147 - -
Lac5g2480 484 MobiDBLite consensus disorder prediction 1 61 - -
Lac5g2480 484 MobiDBLite consensus disorder prediction 24 39 - -
Lac5g2480 484 Gene3D - 60 143 - -
Lac5g2480 484 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 61 272 IPR039204 GO:0015095(PANTHER)|GO:0015693(PANTHER)
Lac5g2480 484 Gene3D Magnesium transport protein CorA, transmembrane region 190 275 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac5g2480 Lac-Chr5:43364428 Lac6g0802 Lac-Chr6:6877473 1.70E-29 dispersed
Lac5g2480 Lac-Chr5:43364428 Lac11g2650 Lac-Chr11:42485541 9.90E-38 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac5g2480 K16075 - csv:101203496 365.925