Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lac5g2482 | ATGGCTTCTCGTTTCTGGACCCAGGGTGGTGGGAGTGGTAGTGATTCTGAAGCGGAGGAGAGTGACTATGATGAAGAGATTGACGACTTACCGACTGATCCTAGCTCCCAACCGAATAGAAGCAGATATCTGCAAGGGAATGCCAGTGACAGTGACGATTCTGATAAAGATAAACGTACTGTCAGGTCGGCTAAAGATAAGCGTTTTGAGGAGATGTCTGCTACTGTGGATCAGATGAAAAATGCAATGAAGATCAATGACTGGGTAAGCCTGCAGGAGAGTTTTGATAAGATAAATAAACAGCTTGAGAAAGTCATGCGTGTTACCGAGTCTGAGAAGGTGCCAACTCTTTATATTAAAGCACTTGTGATGCTAGAGGACTTCCTGAATCAAGCCATGGCTAATAAGGAAGCCAAGAAGAAAATGAGTACTAGCAATGCTAAGGCCTTGAATTCAATGAAACAGAAGCTAAAAAAGAACAATAAGCAATATGAAGAGTTAATTACCAAGTGTAGGGAGAATCCTGAGGTTGAGGAAGAAAAGGATGAAGAGTTGGAGTCGGAGGAGGATGATGATGACGATTCTGAGATTGAGGAGGATCCTTCTAAAATCATGTCAGGATCAGAAGATGAGGATGAGGAAGAAGCCCAAGAGGATGGGCCTGGGCCCGGTGGTAACTGGGTGATACAGCTGAGCAAAAGAGATAAGCTCATGGATAAGCAATTTATGAAGGATCCTAGTGAGATCACATGGGACACTGTTAACAAGAAATTTAAGGAGGTTGTGGCTGCCCGGGGTAGGAAGGGAACCGGAAGATTTGAGCAGGTTGAGCAGCTTACATTCTTAACAAAAGTTGCTAAGACCCCTGCACAGAAGCTTGAGATTTTGTTCAGTGTTATATCTGCTCAATTTGATGTTAATCCAGGTCTCAGTGGACACATGCCTATCAGTGTGTGGAAGAAGTGTGTGCATAATATGCTTTCTATAATTGACATTCTTGTGCAGAATTCTAACATTGTGGTGGATGATATGGTTGAACCTGATGAGAATGAGAGCCAGAAGCCAGCTGATTATAAGGGCACAATTCGTGTTTGGGGAAACTTGGTTGCTTTTGTTGAGAGGATCGACACTGAGTTTTTTAAGAGTCTGCAGTGTATTGATCCACATACGCGTGAGTATGTTGAAAGACTCAGAGATGAGCCAATGTTTATGGTTCTTGCTCAGAATGTCCAAGAATATTTGGAACGAACTGGGGATTACAAAGCAGCTTCGAAAGTTGCCTTAAGACGTGTTGAACTGATTTATTACAAACCACAAGAGGTCTATGATGCCATGAGAAAGCTTGCAGAGCTGTCAGAAGATGGAGATAGTGGAGATGCAAATGAAGAGGCTAAAGTTGTAGAAGAGAGCAGGGGCCCTGCTGCATTTATTGTCACACCGGAGCTCGTTCCTCGCAAACCCACCTTTCCAGAGAGTAGTAGAGCTTTTATGGACATTCTAGTGACGCTCATATACCAATATGGAGATGAGCGCACTAAAGCACGAGCTATGCTCTGTGATATTTACCAACATGCTCTCTTGGATGAATTTTATATTTCTCGTGACTTGTTGCTGATGAGTCACTTGCAGGATAGTATTCAACACTTGGACATTTCAACACAGATCCTTTTCAATAGGGCAATGGCTCAACTTGGTCTATGCGGATTTCGGGTTGGCCTGATTAATGAAGGGCATGGCTGCCTTTCAGAATTATATTCTGGTGGAAGGGTGAAGGAATTGCTTGCACAAGGTGTCTCTCAAAGCCGATATCATGAAAAGACTCCAGAACAGGAAAGGCTTGAAAGAAGGAGGCAGATGCCATATCACATGCATATAAATCTTGAGCTCCTGGAGGCTGTGCATTTAATATGTGCTATGCTGCTGGAAGTTCCCAACATGGCAGGCAATCTTCATGATGCAAAGCGCAAGGTTATTAGTAAGAACTTTAGAAGGTTACTTGAGGTGAGTGAGAGACAAACGTTCACCGGTCCTCCTGAGAATGTCAGAGATCACGTAATGGCTGCTACCAGAGCCCTTCGCAAGGGAGATTTCCAGAAGGCGTTTGATGTCATTGCATCTCTTGATGTATGGAAGCTACTTAGGAATCGTGATGGAGTGCTGGAAATGGTTAAAGGAAAGATTAAGGAGGAAGCTCTGAGGACTTACCTTCTCACATACTCTTCGTCTTATGATTCTCTGAGTTCAGAACAACTCACCCGAATGTTCGACCTCGCAGATGGTCAAACACACAGTATTGTCAGCAAGATGATGATCAATGAGGAGCTCCATGCAAGTTGGGATCAGCCAAGTGCGTGTGTGATCTTCCATGATGTTACACACACCCGGTTACAGGGCCTGGCATTCCAGTTGGCAGATAAGCTGTCAATCCTTGCTGAAACTAATGAGAGGGCAGTGGAGGCAAGAATAGGAGGAGGACTAGATTTACCAATGAGGCGAAGAGACAACCAGGAATATGCTGCTGGAGCTGTAGGTGGTGGGGGTAGTAGGTGGCCAGACAACATGTCTTATAATCAAGGAAGGCAAGGTGGTGGTGGTTCGCGTGCAGGATATAGCAGCGGGGGACGAGGTCAAGGTGGGGGTGGTGGATATTCTAGAGACCGGACAGGTCAGTCACGAGGAGGCAATTCAGGATACCAAAGCACCCGTTATCAAGATGCCGCATATGGATCGGGGAGGACTGCTTATCAGTCTGGTTCTGTGCGAGGATCCCAGATGGATGCTTCAGCTCGCATGGTCAGTCTCAACAAAGGGGTTCATGCTTAA | 2823 | 45.09 | MASRFWTQGGGSGSDSEAEESDYDEEIDDLPTDPSSQPNRSRYLQGNASDSDDSDKDKRTVRSAKDKRFEEMSATVDQMKNAMKINDWVSLQESFDKINKQLEKVMRVTESEKVPTLYIKALVMLEDFLNQAMANKEAKKKMSTSNAKALNSMKQKLKKNNKQYEELITKCRENPEVEEEKDEELESEEDDDDDSEIEEDPSKIMSGSEDEDEEEAQEDGPGPGGNWVIQLSKRDKLMDKQFMKDPSEITWDTVNKKFKEVVAARGRKGTGRFEQVEQLTFLTKVAKTPAQKLEILFSVISAQFDVNPGLSGHMPISVWKKCVHNMLSIIDILVQNSNIVVDDMVEPDENESQKPADYKGTIRVWGNLVAFVERIDTEFFKSLQCIDPHTREYVERLRDEPMFMVLAQNVQEYLERTGDYKAASKVALRRVELIYYKPQEVYDAMRKLAELSEDGDSGDANEEAKVVEESRGPAAFIVTPELVPRKPTFPESSRAFMDILVTLIYQYGDERTKARAMLCDIYQHALLDEFYISRDLLLMSHLQDSIQHLDISTQILFNRAMAQLGLCGFRVGLINEGHGCLSELYSGGRVKELLAQGVSQSRYHEKTPEQERLERRRQMPYHMHINLELLEAVHLICAMLLEVPNMAGNLHDAKRKVISKNFRRLLEVSERQTFTGPPENVRDHVMAATRALRKGDFQKAFDVIASLDVWKLLRNRDGVLEMVKGKIKEEALRTYLLTYSSSYDSLSSEQLTRMFDLADGQTHSIVSKMMINEELHASWDQPSACVIFHDVTHTRLQGLAFQLADKLSILAETNERAVEARIGGGLDLPMRRRDNQEYAAGAVGGGGSRWPDNMSYNQGRQGGGGSRAGYSSGGRGQGGGGGYSRDRTGQSRGGNSGYQSTRYQDAAYGSGRTAYQSGSVRGSQMDASARMVSLNKGVHA | 940 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 43377002 | 43380916 | - | Lag0019566.1 | Lac5g2482 | 609124 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lac5g2482 | 940 | MobiDBLite | consensus disorder prediction | 169 | 228 | - | - | |
Lac5g2482 | 940 | MobiDBLite | consensus disorder prediction | 888 | 902 | - | - | |
Lac5g2482 | 940 | Pfam | PCI domain | 719 | 790 | IPR000717 | - | |
Lac5g2482 | 940 | MobiDBLite | consensus disorder prediction | 139 | 157 | - | - | |
Lac5g2482 | 940 | MobiDBLite | consensus disorder prediction | 1 | 75 | - | - | |
Lac5g2482 | 940 | PANTHER | EUKARYOTIC TRANSLATION INITATION FACTOR 3, SUBUNIT 8 EIF3S8 -RELATED | 1 | 892 | IPR027516 | GO:0003723(InterPro)|GO:0003743(PANTHER)|GO:0003743(InterPro)|GO:0005852(InterPro)|GO:0005852(PANTHER)|GO:0006413(PANTHER)|GO:0006413(InterPro)|GO:0031369(InterPro)|GO:0031369(PANTHER) | |
Lac5g2482 | 940 | MobiDBLite | consensus disorder prediction | 49 | 74 | - | - | |
Lac5g2482 | 940 | SMART | motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 | 722 | 810 | IPR000717 | - | |
Lac5g2482 | 940 | SUPERFAMILY | Winged helix DNA-binding domain | 719 | 792 | IPR036390 | - | |
Lac5g2482 | 940 | Pfam | Eukaryotic translation initiation factor 3 subunit 8 N-terminus | 48 | 653 | IPR008905 | GO:0003743(InterPro)|GO:0005852(InterPro)|GO:0006413(InterPro)|GO:0031369(InterPro) | |
Lac5g2482 | 940 | Hamap | Eukaryotic translation initiation factor 3 subunit C [EIF3C]. | 2 | 869 | IPR027516 | GO:0003723(InterPro)|GO:0003743(InterPro)|GO:0005852(InterPro)|GO:0006413(InterPro)|GO:0031369(InterPro) | |
Lac5g2482 | 940 | MobiDBLite | consensus disorder prediction | 178 | 219 | - | - | |
Lac5g2482 | 940 | MobiDBLite | consensus disorder prediction | 840 | 902 | - | - | |
Lac5g2482 | 940 | MobiDBLite | consensus disorder prediction | 1 | 15 | - | - | |
Lac5g2482 | 940 | MobiDBLite | consensus disorder prediction | 17 | 31 | - | - | |
Lac5g2482 | 940 | MobiDBLite | consensus disorder prediction | 139 | 158 | - | - | |
Lac5g2482 | 940 | MobiDBLite | consensus disorder prediction | 851 | 865 | - | - | |
Lac5g2482 | 940 | Coils | Coil | 147 | 174 | - | - | |
Lac5g2482 | 940 | MobiDBLite | consensus disorder prediction | 32 | 48 | - | - | |
Lac5g2482 | 940 | ProSiteProfiles | PCI domain profile. | 621 | 793 | IPR000717 | - |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lac5g2482 | K03252 | - | csv:101203990 | 1566.98 |