Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac5g2551 ATGGAAACTTACGTGGATAAGAAACACAAGAAGGTGGAGTTGGTTGATGGAGATCTGGGGATCCTTCTTGAGTTTAGACAGGCTATCATTAATGGTTGTTGGCAGCAAGATAAAATGATAAATTGGCTCCAAGTCACTATAGGGAAGGAAGTGGGAGCTGGGAGGAGGAAGGATAGGAATGGTTATAGTATAGTAATGACCACCAGTCTCTCATCAGATGTACCTGTTGGATACTTCTCCTGGGCCGAGTATGATATCATGGCTCCAGTGCAGGAAAAGAGTGAAAGTGCCCTTGCAGCTGCTTTCATTTCAAATTGTGGTGCTCGTAACTTTCGCATGGAAGCTCTTGAGGCTCTTGAAAAGCTGAATGTCACAATAGATTCATATGGTGCTTGCCACAGAAATCGTGATGGAAATGCAGTGGACAAAGTGGAGACTCTGAAGCGCTACAAGTTCAGCTTGGCTTTTGAGAATTCCAACGAGGAAGATTATGTGACAGAAAAATATTTCCAATCTCTAGTTGCTGGAGCTGTTCCAGTGGTTATTGGAGCTCCAAATATTCAAGAGTTTGCTCCTTCACCTACTTCATTTTTGCATATCAAGGAGGTTTCAGATGTTGAGTCAGTTGCCAACTCTATGAAATACCTTGCAGCAAATCCTGATGCTTTCAACAACTCTTTGAGGTGGAAATATGAGGGTCCGTCTGATTCTTTCAAGGCACTATTGGATATGGCAGCTGTTCATTCGTCATGCCGCCTTTGTATTCATTTAGCAACTAGTATTCATGAGACAGAAGAAAAGGGTCTAGCGTTCAAAAAGCGACCTTGTAAATGCACCAGAGGTTCAGAGACTGTTTATCACTTGTTTGTAAGAGAAAGAGGAAGGTTTAATTCAGAGTCCATTTTCTTGAGGTCCAGTAATCTGACCATTGAAGGATTGGCGTCAGCAGTGGTTTCGAAGTTCAATTCTCTTAAGCATGAACCAATTTGGAAGCAGGAAAGGCCTAAAAGCATAAGAGGGGATGAATTAAGGTTGTATAAAATCTACCCAGTTGGGTTGACACAGAAGCAAGCTTTATATGCATTCAAATTTAAAGGGGACTCTGATCTCAGAAGACACGTGGAAGATAACCCATGTGCCAAATTTGAAGTCATTTTTGTATAG 1164 41.75 METYVDKKHKKVELVDGDLGILLEFRQAIINGCWQQDKMINWLQVTIGKEVGAGRRKDRNGYSIVMTTSLSSDVPVGYFSWAEYDIMAPVQEKSESALAAAFISNCGARNFRMEALEALEKLNVTIDSYGACHRNRDGNAVDKVETLKRYKFSLAFENSNEEDYVTEKYFQSLVAGAVPVVIGAPNIQEFAPSPTSFLHIKEVSDVESVANSMKYLAANPDAFNNSLRWKYEGPSDSFKALLDMAAVHSSCRLCIHLATSIHETEEKGLAFKKRPCKCTRGSETVYHLFVRERGRFNSESIFLRSSNLTIEGLASAVVSKFNSLKHEPIWKQERPKSIRGDELRLYKIYPVGLTQKQALYAFKFKGDSDLRRHVEDNPCAKFEVIFV 387
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 44085010 44088923 + Lag0019635.1 Lac5g2551 609193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac5g2551 387 Gene3D - 58 237 IPR038577 -
Lac5g2551 387 PANTHER ALPHA- 1,3 -FUCOSYLTRANSFERASE 58 359 IPR001503 GO:0006486(InterPro)|GO:0008417(InterPro)|GO:0016020(InterPro)|GO:0036065(PANTHER)|GO:0046920(PANTHER)
Lac5g2551 387 FunFam Glycoprotein 3-alpha-L-fucosyltransferase A 50 237 - -
Lac5g2551 387 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 60 261 - -
Lac5g2551 387 Pfam Glycosyltransferase family 10 (fucosyltransferase) C-term 96 262 IPR001503 GO:0006486(InterPro)|GO:0008417(InterPro)|GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac5g2551 Lac-Chr5:44085010 Lac4g1638 Lac-Chr4:35106449 1.50E-145 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac5g2551 K00753 - csv:101202837 595.504