Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac5g2574 ATGAAACGCGGCGCCATTCGATTAGATCAAGGAAGTGGAGCCCACATGAGGATACGAAAGATTTGGTGTATACGCGACACAGGTGATCACAACCACTCCGACTTCACCAACCCCAAAACCCTATTGCTGAGATGTCGTCTTCATCGATCTGCCATTGCTCTGTATTCTATTTATCTCCTTCCATTCCATTCTCATTTCACCAACTCAAATCTTCCTTCTCTCTCTGCAACTTCTTTTCCCAGATTCTTTCAGCTTTCTCCGTTTGAAATGGGCAGCATTCAAGCCGACAGAACGGTCACCGGATTGGCTGCCAAAGACCCATCTGGGATTCTCTCTCCCTACACTTATACTCTCAGAAACACCGGCCCACAAGATGTTTTCATCAAAGTAATCTGCTGTGGAATCTGCCACTCTGATCTTCACCAAATGAAAAATGATCTCGGCATGTCCAATTACCCCATGGTTCCTGGACACGAGGTCGTCGGAGAAGTGGTGGAGGTTGGATCGGAAGTCGATCGGTTCAGAGCAGGGGAGTTGGTCGGAGTTGGGTGTATTGTTGGATCCTGTTCGAGTTGCAGTCCTTGCAATTCCGATAAGGAGCAGTATTGTAACAAGAGAATCTGGAGTTACAACGATGTGTATCACGACGGCCGCCCCACCCAAGGCGGGTTCTCCTCTGCCATGGTCGTCCACCAAAAGTTTGTGGTGAAAATCCCAGAAGGGATGTCGCCGGAGCAGGCGGCGCCGCTGCTGTGCGCCGGAGTGACGGTGTACAGTCCGCTGAGCCACTTTGGGCTGAAACAGAGTGGGCTCAGAGGCGGAATTTTGGGGCTGGGCGGCGTCGGGCACATGGGTGTGAAAGTGGCGAAGGCTTTGGGCCACCACGTGACGGTGATAAGCTCGTCGGAGAAGAAGAGGGAGGAGGCTCTGGAGCATCTCGGCGCCGACGAGTACTTGGTCAGCTCGGACGCCGCTCAGATGGGACGAGCCATTGACTCGCTCGATTACATCATCGACACAGTCCCTGTCAATCATCCTCTTGAGCCGTATCTCTCGCTCCTAAAACTCGACGGCAAATTGATCATGATGGGCGTCATTAATACTCCATTGCAATTCGTTTCCCCACTCCTTATGCTCGGGAGGAAGACGATTACAGGGAGCTTCATCGGAAGCATGACAGAGACACAAGAAGTGTTGGATTTCTTCAAAGAAAAGGAGCTGACCTCCATGATCGAAGTGATAAAGCTCGATTACATAAACAAGGCCTTCGAGAGGTTGGAGAAGAACGACGTTAGATACAGGTTCGTCGTCGACGTCGCCGGAAGTAAGTTGCCTCAGTGA 1341 51.3 MKRGAIRLDQGSGAHMRIRKIWCIRDTGDHNHSDFTNPKTLLLRCRLHRSAIALYSIYLLPFHSHFTNSNLPSLSATSFPRFFQLSPFEMGSIQADRTVTGLAAKDPSGILSPYTYTLRNTGPQDVFIKVICCGICHSDLHQMKNDLGMSNYPMVPGHEVVGEVVEVGSEVDRFRAGELVGVGCIVGSCSSCSPCNSDKEQYCNKRIWSYNDVYHDGRPTQGGFSSAMVVHQKFVVKIPEGMSPEQAAPLLCAGVTVYSPLSHFGLKQSGLRGGILGLGGVGHMGVKVAKALGHHVTVISSSEKKREEALEHLGADEYLVSSDAAQMGRAIDSLDYIIDTVPVNHPLEPYLSLLKLDGKLIMMGVINTPLQFVSPLLMLGRKTITGSFIGSMTETQEVLDFFKEKELTSMIEVIKLDYINKAFERLEKNDVRYRFVVDVAGSKLPQ 446
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 44271303 44272966 - Lag0019658.1 Lac5g2574 609216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac5g2574 446 FunFam Putative cinnamyl alcohol dehydrogenase 6 410 439 - -
Lac5g2574 446 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 242 407 IPR036291 -
Lac5g2574 446 PANTHER ALDEHYDE REDUCTASE 98 441 IPR047109 GO:0009809(PANTHER)|GO:0016616(PANTHER)|GO:0016616(InterPro)|GO:0045551(PANTHER)
Lac5g2574 446 CDD CAD1 100 438 IPR047109 GO:0016616(InterPro)
Lac5g2574 446 Pfam Alcohol dehydrogenase GroES-like domain 122 240 IPR013154 -
Lac5g2574 446 Gene3D - 103 439 - -
Lac5g2574 446 Gene3D - 253 409 - -
Lac5g2574 446 FunFam probable cinnamyl alcohol dehydrogenase 102 259 - -
Lac5g2574 446 Pfam Zinc-binding dehydrogenase 280 403 IPR013149 -
Lac5g2574 446 SUPERFAMILY GroES-like 106 270 IPR011032 -
Lac5g2574 446 SMART PKS_ER_names_mod 109 437 IPR020843 GO:0016491(InterPro)
Lac5g2574 446 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 157 171 IPR002328 GO:0008270(InterPro)|GO:0016491(InterPro)
Lac5g2574 446 FunFam Cinnamyl alcohol dehydrogenase 253 409 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac2g0127 Lac-Chr2:960842 Lac5g2574 Lac-Chr5:44271303 5.90E-96 dispersed
Lac5g2574 Lac-Chr5:44271303 Lac9g0322 Lac-Chr9:5203641 8.40E-100 dispersed
Lac12g0210 Lac-Chr12:2340590 Lac5g2574 Lac-Chr5:44271303 6.50E-172 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac5g2574 K00083 - csv:101222395 627.476